RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 RPRD1AQ96P16 312 aaPredicted RBP17.19■□□□□ 0.34
SREK1-212ENST00000522912 CDK5RAP1Q96SZ6 601 aaKnown RBP17.19■□□□□ 0.34
SREK1-212ENST00000522912 ZMYND15Q9H091 742 aa17.19■□□□□ 0.34
SREK1-212ENST00000522912 BFARQ9NZS9 450 aa17.19■□□□□ 0.34
SREK1-212ENST00000522912 SLC17A6Q9P2U8 582 aa17.19■□□□□ 0.34
SREK1-212ENST00000522912 HMX2A2RU54 273 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 J3KR12 359 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 COCHO43405 550 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 EFCAB14O75071 495 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 MT-CYBP00156 380 aaPredicted RBP17.18■□□□□ 0.34
SREK1-212ENST00000522912 URODP06132 367 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 PYGBP11216 843 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 TACR2P21452 398 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 DNAJB2P25686 324 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 GBP2P32456 591 aaPredicted RBP17.18■□□□□ 0.34
SREK1-212ENST00000522912 IL9RQ01113 521 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 HECTD3Q5T447 861 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 OTOP2Q7RTS6 562 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 TMEM199Q8N511 208 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 ALKBH8Q96BT7 664 aaKnown RBP17.18■□□□□ 0.34
SREK1-212ENST00000522912 TGS1Q96RS0 853 aaKnown RBP17.18■□□□□ 0.34
SREK1-212ENST00000522912 C12orf65Q9H3J6 166 aaKnown RBP17.18■□□□□ 0.34
SREK1-212ENST00000522912 SAMD15Q9P1V8 674 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 RPS6KL1Q9Y6S9 549 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.18■□□□□ 0.34
SREK1-212ENST00000522912 PSMD3O43242 534 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 KRT37O76014 449 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 POLBP06746 335 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 TPH1P17752 444 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 TAC1P20366 129 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 ALDH1A3P47895 512 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 NPY2RP49146 381 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 BMPR2Q13873 1038 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 MARK2Q7KZI7 788 aaKnown RBP17.18■□□□□ 0.34
SREK1-212ENST00000522912 PIGWQ7Z7B1 504 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 TCP10LQ8TDR4 215 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 YME1L1Q96TA2 773 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 IL1RAPL1Q9NZN1 696 aa17.18■□□□□ 0.34
SREK1-212ENST00000522912 AAR2Q9Y312 384 aaKnown RBP17.18■□□□□ 0.34
SREK1-212ENST00000522912 MYLKQ15746 1914 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 ZWINTO95229 277 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 SLC6A4P31645 630 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 PLD1Q13393 1074 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 SPANXN3Q5MJ09 141 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 ACBD5Q5T8D3 534 aaPredicted RBP17.17■□□□□ 0.34
SREK1-212ENST00000522912 GKAP1Q5VSY0 366 aaPredicted RBP17.17■□□□□ 0.34
SREK1-212ENST00000522912 NAPEPLDQ6IQ20 393 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 KLHDC10Q6PID8 442 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 LVRNQ6Q4G3 990 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 LGI2Q8N0V4 545 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 FGFR1OP2Q9NVK5 253 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 DONSONQ9NYP3 566 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 TRPM5Q9NZQ8 1165 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 SLC17A7Q9P2U7 560 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 CHD5Q8TDI0 1954 aa17.17■□□□□ 0.34
SREK1-212ENST00000522912 ATP9BO43861 1147 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 ACSL4O60488 711 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 RFPL1O75677 317 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 NEK3P51956 506 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 TWF1Q12792 350 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 SF3A3Q12874 501 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■□□□ 13.2
SREK1-212ENST00000522912 SMAD1Q15797 465 aaKnown RBP17.16■□□□□ 0.34
SREK1-212ENST00000522912 ANO4Q32M45 955 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 FAM133BQ5BKY9 247 aaKnown RBP17.16■□□□□ 0.34
SREK1-212ENST00000522912 RFWD3Q6PCD5 774 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 C6orf89Q6UWU4 347 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 TMEM135Q86UB9 458 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 CACNA2D3Q8IZS8 1091 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 TRMT2BQ96GJ1 504 aaKnown RBP17.16■□□□□ 0.34
SREK1-212ENST00000522912 ELAC2Q9BQ52 826 aaKnown RBP17.16■□□□□ 0.34
SREK1-212ENST00000522912 NACA2Q9H009 215 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 ZCWPW2A0A1B0GU75 182 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 PRRG1O14668 218 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 KRT38O76015 456 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 ANXA9O76027 345 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 BAIAP3O94812 1187 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 ERVK-10P10266 1014 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 ADRA1DP25100 572 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 SERPINB9P50453 376 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 CDH17Q12864 832 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 MTA1Q13330 715 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 HNRNPDQ14103 355 aaKnown RBP17.16■□□□□ 0.34
SREK1-212ENST00000522912 C5orf22Q49AR2 442 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 ANKRD20A4Q4UJ75 823 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 LGSNQ5TDP6 509 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 MROH9Q5TGP6 573 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 HHATQ5VTY9 493 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 DENND5AQ6IQ26 1287 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 LINC00523Q86TU6 105 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 CFAP52Q8N1V2 620 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 DNAJC5GQ8N7S2 189 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 IPMKQ8NFU5 416 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 FATE1Q969F0 183 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 PSMG2Q969U7 264 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 ZNF669Q96BR6 464 aaPredicted RBP17.16■□□□□ 0.34
SREK1-212ENST00000522912 APOPT1Q96IL0 206 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 KLHL5Q96PQ7 755 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 TBL1YQ9BQ87 522 aa17.16■□□□□ 0.34
SREK1-212ENST00000522912 RNF38Q9H0F5 515 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms