RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 GUCA1BQ9UMX6 200 aa16.36■□□□□ 0.21
SSBP1-214ENST00000498107 HS3ST2Q9Y278 367 aa16.36■□□□□ 0.21
SSBP1-214ENST00000498107 HYOU1Q9Y4L1 999 aa16.36■□□□□ 0.21
SSBP1-214ENST00000498107 CHD5Q8TDI0 1954 aa16.36■□□□□ 0.21
SSBP1-214ENST00000498107 EDDM13A0A1B0GTR0 161 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 TARSL2A2RTX5 802 aaKnown RBP16.35■□□□□ 0.21
SSBP1-214ENST00000498107 CCDC66A2RUB6 948 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 ANTXRLA6NF34 631 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 K7ESF4 209 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 DCLK1O15075 740 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 ZSCAN12O43309 604 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 KDELR3O43731 214 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 AMPD1P23109 780 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 CTSOP43234 321 aaPredicted RBP16.35■□□□□ 0.21
SSBP1-214ENST00000498107 PTPN5P54829 565 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 HNRNPA1L2Q32P51 320 aaKnown RBP16.35■□□□□ 0.21
SSBP1-214ENST00000498107 ANKRD20A8PQ5CZ79 823 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 TMEM92Q6UXU6 159 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 PEX26Q7Z412 305 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 KATNAL2Q8IYT4 538 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 LRRC57Q8N9N7 239 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.35■□□□□ 0.21
SSBP1-214ENST00000498107 CASKIN2Q8WXE0 1202 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 RBM41Q96IZ5 413 aaKnown RBP16.35■□□□□ 0.21
SSBP1-214ENST00000498107 RPL10LQ96L21 214 aaKnown RBP16.35■□□□□ 0.21
SSBP1-214ENST00000498107 ALS2CR12Q96Q35 445 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 PPP2R2CQ9Y2T4 447 aa16.35■□□□□ 0.21
SSBP1-214ENST00000498107 A0A1W2PQF6 199 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 TCRBV21S2A2A0A5A6 115 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 GRID2IPA4D2P6 1211 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 MIF4GDA9UHW6 222 aaKnown RBP16.34■□□□□ 0.21
SSBP1-214ENST00000498107 WASH3PC4AMC7 463 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 ATP9BO43861 1147 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 SNAP91O60641 907 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 PALMO75781 387 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 ZRANB2O95218 330 aaKnown RBP eCLIP16.34■□□□□ 0.21
SSBP1-214ENST00000498107 CD48P09326 243 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 ZFXP17010 805 aaPredicted RBP16.34■□□□□ 0.21
SSBP1-214ENST00000498107 IL4RP24394 825 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 PRKCHP24723 683 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 CTNNA1P35221 906 aaKnown RBP16.34■□□□□ 0.21
SSBP1-214ENST00000498107 ACVRL1P37023 503 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 CETN2P41208 172 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 SERINC3Q13530 473 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 CAMK2GQ13555 558 aaPredicted RBP16.34■□□□□ 0.21
SSBP1-214ENST00000498107 ACCSLQ4AC99 568 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 LRRC49Q8IUZ0 686 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 RCOR2Q8IZ40 523 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 MAML2Q8IZL2 1156 aaPredicted RBP16.34■□□□□ 0.21
SSBP1-214ENST00000498107 SH2D3CQ8N5H7 860 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 UBL4BQ8N7F7 174 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 ATP11CQ8NB49 1132 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 EXD1Q8NHP7 514 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 RAPGEF5Q92565 580 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 FAF2Q96CS3 445 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 MYO19Q96H55 970 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 CCDC114Q96M63 670 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 HHIPQ96QV1 700 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 GOLPH3Q9H4A6 298 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 NOL6Q9H6R4 1146 aaKnown RBP16.34■□□□□ 0.21
SSBP1-214ENST00000498107 LRRC19Q9H756 370 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 KLHL11Q9NVR0 708 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 C2orf42Q9NWW7 574 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 BCCIPQ9P287 314 aaKnown RBP eCLIP16.34■□□□□ 0.21
SSBP1-214ENST00000498107 TRIM10Q9UDY6 481 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 EBF1Q9UH73 591 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 SLCO3A1Q9UIG8 710 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 PCDHA3Q9Y5H8 950 aa16.34■□□□□ 0.21
SSBP1-214ENST00000498107 CKAP5Q14008 2032 aa16.33■□□□□ 0.21
SSBP1-214ENST00000498107 NUP205Q92621 2012 aa16.33■□□□□ 0.21
SSBP1-214ENST00000498107 RNASEH1O60930 286 aaKnown RBP16.33■□□□□ 0.2
SSBP1-214ENST00000498107 ZMPSTE24O75844 475 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 SP9P0CG40 484 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 HLA-EP13747 358 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 CTNNA2P26232 953 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 STK19P49842 368 aaPredicted RBP16.33■□□□□ 0.2
SSBP1-214ENST00000498107 SERPINH1P50454 418 aaKnown RBP16.33■□□□□ 0.2
SSBP1-214ENST00000498107 MMRN1Q13201 1228 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 AFMIDQ63HM1 303 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 ANO7Q6IWH7 933 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 ZC3H14Q6PJT7 736 aaKnown RBP16.33■□□□□ 0.2
SSBP1-214ENST00000498107 LONP2Q86WA8 852 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 PGBD3Q8N328 593 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 OR2T3Q8NH03 318 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 PCDH19Q8TAB3 1148 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 HMCESQ96FZ2 354 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 RNF157Q96PX1 679 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 CEP44Q9C0F1 390 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 KLC2Q9H0B6 622 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 LZTFL1Q9NQ48 299 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 ZSCAN32Q9NX65 697 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 FARP1Q9Y4F1 1045 aaPredicted RBP16.33■□□□□ 0.2
SSBP1-214ENST00000498107 PCDHGA2Q9Y5H1 932 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 RAD54BQ9Y620 910 aa16.33■□□□□ 0.2
SSBP1-214ENST00000498107 MUC22E2RYF6 1773 aaPredicted RBP16.33■□□□□ 0.2
SSBP1-214ENST00000498107 A0A0U1RQJ8 604 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 TTC34A8MYJ7 566 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 DFFAO00273 331 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 AXIN1O15169 862 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 CACNA1HO95180 2353 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms