RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ALDH8A1Q9H2A2 487 aaPredicted RBP4.86□□□□□ -1.63
VPS13A-211ENST00000484581 CHORDC1Q9UHD1 332 aaPredicted RBP4.86□□□□□ -1.63
VPS13A-211ENST00000484581 AMFRQ9UKV5 643 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 KCNE2Q9Y6J6 123 aa4.86□□□□□ -1.63
VPS13A-211ENST00000484581 PABPN1LA6NDY0 278 aaKnown RBP4.85□□□□□ -1.63
VPS13A-211ENST00000484581 LIPT2A6NK58 231 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 AP4M1O00189 453 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 SYN3O14994 580 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 LDLRAD4O15165 306 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 PRAMEF2O60811 474 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 KAT7O95251 611 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 TUBB4AP04350 444 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 CHRM4P08173 479 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 ITPKBP27987 946 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 PCSK6P29122 969 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 SLC8A1P32418 973 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 GJC1P36383 396 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 NNMTP40261 264 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 CTCFP49711 727 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-211ENST00000484581 DIO1P49895 249 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 GPC5P78333 572 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 NEXNQ0ZGT2 675 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 CDC16Q13042 620 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 STK4Q13043 487 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 BMPR2Q13873 1038 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 SLC9B1Q4ZJI4 515 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 SH2D4BQ5SQS7 431 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 PLEKHS1Q5SXH7 462 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 ZKSCAN2Q63HK3 967 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 Q6ZWC4 215 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 TAGAPQ8N103 731 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 TOR1AIP2Q8NFQ8 470 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 CNOT9Q92600 299 aaKnown RBP4.85□□□□□ -1.63
VPS13A-211ENST00000484581 PTCD3Q96EY7 689 aaKnown RBP4.85□□□□□ -1.63
VPS13A-211ENST00000484581 RADILQ96JH8 1075 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 BBC3Q96PG8 261 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-211ENST00000484581 SNX18Q96RF0 628 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 YME1L1Q96TA2 773 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 PCDHB16Q9NRJ7 776 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 TBCCD1Q9NVR7 557 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 SLCO3A1Q9UIG8 710 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 CDH22Q9UJ99 828 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 CORO1CQ9ULV4 474 aaPredicted RBP4.85□□□□□ -1.63
VPS13A-211ENST00000484581 VPS4AQ9UN37 437 aa4.85□□□□□ -1.63
VPS13A-211ENST00000484581 TEX13CA0A0J9YWL9 993 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 FAM170AA1A519 330 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 GCOM1H8Y6P7 765 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 BCAT2O15382 392 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 HBP1O60381 514 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 ERAL1O75616 437 aaKnown RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 BEST1O76090 585 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 SPDEFO95238 335 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 GLULP15104 373 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 ZFXP17010 805 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 PPARGP37231 505 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 PDE1AP54750 535 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 PSG6Q00889 435 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 GUCY1B3Q02153 619 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 AIMP2Q13155 320 aaKnown RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 PTPRRQ15256 657 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 RASA2Q15283 850 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 ZNF667Q5HYK9 610 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 UBAP2Q5T6F2 1119 aaKnown RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 LRCH2Q5VUJ6 765 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 RPUSD3Q6P087 351 aaKnown RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 CDC73Q6P1J9 531 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 TMEM81Q6P7N7 255 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 KYAT3Q6YP21 454 aaKnown RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 PARS2Q7L3T8 475 aaKnown RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 SFTPA1Q8IWL2 248 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 BRSK2Q8IWQ3 736 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 WDTC1Q8N5D0 677 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 C12orf76Q8N812 135 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 ARHGEF2Q92974 986 aaKnown RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 RFKQ969G6 155 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 EDC3Q96F86 508 aaKnown RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 KLHL15Q96M94 604 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 HDHD5Q9BXW7 423 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 TRIM31Q9BZY9 425 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 SFXN1Q9H9B4 322 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 USP29Q9HBJ7 922 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 KCTD5Q9NXV2 234 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 EHD2Q9NZN4 543 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 DKK3Q9UBP4 350 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 MORF4L1Q9UBU8 362 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 ZNF70Q9UC06 446 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 SLC25A13Q9UJS0 675 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 CCNL1Q9UK58 526 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 FZD4Q9ULV1 537 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 ZNF711Q9Y462 761 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 INSL6Q9Y581 213 aa4.84□□□□□ -1.63
VPS13A-211ENST00000484581 MAGED1Q9Y5V3 778 aaPredicted RBP4.84□□□□□ -1.63
VPS13A-211ENST00000484581 VWC2LB2RUY7 222 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 H7C0S8 307 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 C1RP00736 705 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 EIF2S1P05198 315 aaKnown RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 APOA4P06727 396 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 HKR1P10072 659 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 PKMP14618 531 aaKnown RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 NDUFS1P28331 727 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms