RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-204ENST00000478061 FAF2Q96CS3 445 aa13.1□□□□□ -0.31
RBM28-204ENST00000478061 CELF6Q96J87 481 aaKnown RBP13.1□□□□□ -0.31
RBM28-204ENST00000478061 RPL10LQ96L21 214 aaKnown RBP13.1□□□□□ -0.31
RBM28-204ENST00000478061 HHIPQ96QV1 700 aa13.1□□□□□ -0.31
RBM28-204ENST00000478061 ZNF670Q9BS34 389 aa13.1□□□□□ -0.31
RBM28-204ENST00000478061 LRRC19Q9H756 370 aa13.1□□□□□ -0.31
RBM28-204ENST00000478061 CD248Q9HCU0 757 aa13.1□□□□□ -0.31
RBM28-204ENST00000478061 ATP13A1Q9HD20 1204 aa13.1□□□□□ -0.31
RBM28-204ENST00000478061 DDX56Q9NY93 547 aaKnown RBP13.1□□□□□ -0.31
RBM28-204ENST00000478061 FBXO4Q9UKT5 387 aa13.1□□□□□ -0.31
RBM28-204ENST00000478061 GUCA1BQ9UMX6 200 aa13.1□□□□□ -0.31
RBM28-204ENST00000478061 RAD54BQ9Y620 910 aa13.1□□□□□ -0.31
RBM28-204ENST00000478061 CAPN6Q9Y6Q1 641 aa13.1□□□□□ -0.31
RBM28-204ENST00000478061 CACNA1HO95180 2353 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 TTC34A8MYJ7 566 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 ZNF487B1APH4 448 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 CBX4O00257 560 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 MT-CO1P00395 513 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 CTNNA2P26232 953 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 HOXA6P31267 233 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 CSTF1Q05048 431 aaKnown RBP13.09□□□□□ -0.31
RBM28-204ENST00000478061 SERINC3Q13530 473 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 PARP15Q460N3 678 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 TMCO3Q6UWJ1 677 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 LINGO4Q6UY18 593 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 NT5DC3Q86UY8 548 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 VSIG1Q86XK7 387 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 ARHGAP12Q8IWW6 846 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 KATNAL2Q8IYT4 538 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 LZTR1Q8N653 840 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 PQLC3Q8N755 202 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 ZNF366Q8N895 744 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 PRSS33Q8NF86 280 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 TSTD1Q8NFU3 115 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 ERLEC1Q96DZ1 483 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 SLC39A8Q9C0K1 460 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 MTG2Q9H4K7 406 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 LZTFL1Q9NQ48 299 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 SLC25A13Q9UJS0 675 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 HS3ST2Q9Y278 367 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 PCDHA3Q9Y5H8 950 aa13.09□□□□□ -0.31
RBM28-204ENST00000478061 ARHGAP42A6NI28 874 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 K7ERQ8 282 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 KDELR3O43731 214 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 ATP9BO43861 1147 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 APBB3O95704 486 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 FTCDO95954 541 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 EPHX1P07099 455 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 SP9P0CG40 484 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 CTNNA1P35221 906 aaKnown RBP13.08□□□□□ -0.32
RBM28-204ENST00000478061 NNMTP40261 264 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 PXNP49023 591 aaPredicted RBP13.08□□□□□ -0.32
RBM28-204ENST00000478061 PAPOLAP51003 745 aaKnown RBP13.08□□□□□ -0.32
RBM28-204ENST00000478061 ARF5P84085 180 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 SLC20A2Q08357 652 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 DMWDQ09019 674 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 CAMK2GQ13555 558 aaPredicted RBP13.08□□□□□ -0.32
RBM28-204ENST00000478061 STARD3Q14849 445 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 TAZQ16635 292 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 HNRNPA1L2Q32P51 320 aaKnown RBP13.08□□□□□ -0.32
RBM28-204ENST00000478061 RETSATQ6NUM9 610 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 MFSD7Q6UXD7 560 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 PEX26Q7Z412 305 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 TP53INP2Q8IXH6 220 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 SYCE1Q8N0S2 351 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 SH2D3CQ8N5H7 860 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 CAMKK1Q8N5S9 505 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 NETO2Q8NC67 525 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 FRS2Q8WU20 508 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
RBM28-204ENST00000478061 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 PRRX2Q99811 253 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 POLMQ9NP87 494 aaPredicted RBP13.08□□□□□ -0.32
RBM28-204ENST00000478061 PRSS16Q9NQE7 514 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 SUN2Q9UH99 717 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 AMFRQ9UKV5 643 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 HPCAL4Q9UM19 191 aa13.08□□□□□ -0.32
RBM28-204ENST00000478061 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.08□□□□□ -0.32
RBM28-204ENST00000478061 CXorf51AA0A1B0GTR3 108 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 TCRBV21S2A2A0A5A6 115 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 CCDC66A2RUB6 948 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 DFFAO00273 331 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 SMAD6O43541 496 aaKnown RBP13.07□□□□□ -0.32
RBM28-204ENST00000478061 SYNCRIPO60506 623 aaKnown RBP13.07□□□□□ -0.32
RBM28-204ENST00000478061 ZRANB2O95218 330 aaKnown RBP eCLIP13.07□□□□□ -0.32
RBM28-204ENST00000478061 CD160O95971 181 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 SRCP12931 536 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 VAV1P15498 845 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 CDKN2BP42772 138 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 SERPINH1P50454 418 aaKnown RBP13.07□□□□□ -0.32
RBM28-204ENST00000478061 PEX5P50542 639 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 TCF15Q12870 199 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 PAFAH1B3Q15102 231 aaKnown RBP13.07□□□□□ -0.32
RBM28-204ENST00000478061 DLG2Q15700 870 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 ZNF528Q3MIS6 628 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 ODF2Q5BJF6 829 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 NCBP2-AS2Q69YL0 99 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 HEATR6Q6AI08 1181 aaKnown RBP13.07□□□□□ -0.32
RBM28-204ENST00000478061 ANO7Q6IWH7 933 aa13.07□□□□□ -0.32
RBM28-204ENST00000478061 LEKR1Q6ZMV7 388 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms