RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 RPS27LQ71UM5 84 aaKnown RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 PCDH19Q8TAB3 1148 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 CHURC1Q8WUH1 139 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 BHMTQ93088 406 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 AGAP2Q99490 1192 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 NGRNQ9NPE2 291 aaKnown RBP8.1□□□□□ -1.11
TPM3-215ENST00000469717 ZDHHC2Q9UIJ5 367 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 CNTN6Q9UQ52 1028 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 PCDHB12Q9Y5F1 795 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 PCDHA11Q9Y5I1 949 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 ST14Q9Y5Y6 855 aa8.1□□□□□ -1.11
TPM3-215ENST00000469717 C1orf232A0A0U1RR37 186 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 C9IYK1 514 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 GARTP22102 1010 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 BCAR1P56945 870 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 YBX1P67809 324 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 CLDN10P78369 228 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 RAB39AQ14964 217 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 CHSY3Q70JA7 882 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 CACTIN-AS1Q8N1I8 211 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 Q8N9G6 341 aaPredicted RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 LPGAT1Q92604 370 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 RNF157Q96PX1 679 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 TCHPQ9BT92 498 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 DHX33Q9H6R0 707 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 POLR1BQ9H9Y6 1135 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 SIAEQ9HAT2 523 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 CLK4Q9HAZ1 481 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 RRAGCQ9HB90 399 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 RAVER2Q9HCJ3 691 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 SNX15Q9NRS6 342 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 MRPL11Q9Y3B7 192 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 MYO9BQ13459 2157 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 PRORSD1PA6NEY8 169 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 TCAF2A6NFQ2 919 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 G3V2L1 256 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 ASNSP08243 561 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 INHBBP09529 407 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 HMOX2P30519 316 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 SNRPFP62306 86 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 METTL21CQ5VZV1 264 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 ZFP1Q6P2D0 407 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 GALNT18Q6P9A2 607 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 C16orf89Q6UX73 402 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 ZBTB49Q6ZSB9 765 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 PIGZQ86VD9 579 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 ALDH16A1Q8IZ83 802 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 DCLK2Q8N568 766 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 CATSPER1Q8NEC5 780 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 SGCDQ92629 289 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 GFM2Q969S9 779 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 SLC45A3Q96JT2 553 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 STN1Q9H668 368 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 PNPLA3Q9NST1 481 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 PRPF19Q9UMS4 504 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 SLC27A5Q9Y2P5 690 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 DLGAP1O14490 977 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 PIGNO95427 931 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 ASS1P00966 412 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 MT-ND1P03886 318 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 ATP5BP06576 529 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 MCCD1P59942 119 aaPredicted RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 TGFB2P61812 414 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 TFAMQ00059 246 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 ZNF829Q3KNS6 432 aaPredicted RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 ANKRD26P1Q6NSI1 321 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 TTC33Q6PID6 262 aaPredicted RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 SAPCD2Q86UD0 394 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 BORCS5Q969J3 196 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 HERC2P3Q9BVR0 1158 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 RSAD1Q9HA92 442 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 NCKIPSDQ9NZQ3 722 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 CNOT6Q9ULM6 557 aaKnown RBP8.09□□□□□ -1.11
TPM3-215ENST00000469717 PADI4Q9UM07 663 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 FADS3Q9Y5Q0 445 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 DNAH12Q6ZR08 3092 aa8.09□□□□□ -1.11
TPM3-215ENST00000469717 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.08□□□□□ -1.12
TPM3-215ENST00000469717 ADM5C9JUS6 153 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 C9JVG2 144 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 GRID2O43424 1007 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 ATG7O95352 703 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 NAT2P11245 290 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 VDRP11473 427 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 TBXAS1P24557 533 aaPredicted RBP8.08□□□□□ -1.12
TPM3-215ENST00000469717 GRK2P25098 689 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 POLR2IP36954 125 aaKnown RBP8.08□□□□□ -1.12
TPM3-215ENST00000469717 PPARGP37231 505 aaPredicted RBP8.08□□□□□ -1.12
TPM3-215ENST00000469717 MAGEA3P43357 314 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 RGS7P49802 495 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 ADRM1Q16186 407 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 ARL13AQ5H913 290 aaPredicted RBP8.08□□□□□ -1.12
TPM3-215ENST00000469717 NHSL2Q5HYW2 709 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 CCDC60Q8IWA6 550 aaPredicted RBP8.08□□□□□ -1.12
TPM3-215ENST00000469717 PGAM4Q8N0Y7 254 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 CBR4Q8N4T8 237 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.08□□□□□ -1.12
TPM3-215ENST00000469717 LSM14AQ8ND56 463 aaKnown RBP8.08□□□□□ -1.12
TPM3-215ENST00000469717 CANT1Q8WVQ1 401 aa8.08□□□□□ -1.12
TPM3-215ENST00000469717 NTPCRQ9BSD7 190 aaKnown RBP8.08□□□□□ -1.12
TPM3-215ENST00000469717 NPLQ9BXD5 320 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms