RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TMEM131Q92545 1883 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 TARSL2A2RTX5 802 aaKnown RBP13.21□□□□□ -0.29
COL5A1-206ENST00000465877 AKR1B15C9JRZ8 316 aaPredicted RBP13.21□□□□□ -0.29
COL5A1-206ENST00000465877 ATP9BO43861 1147 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 AKR1B10O60218 316 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 PRPSAP2O60256 369 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 RAMP2O60895 175 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 DNTTP04053 509 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 SRCP12931 536 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 EPHB2P29323 1055 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 CD6P30203 668 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 HTR7P34969 479 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 PTGER3P43115 390 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 ZNF75DP51815 510 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 TPI1P60174 286 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 ARF5P84085 180 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 GNA12Q03113 381 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 ZBTB16Q05516 673 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 ELAVL3Q14576 367 aaKnown RBP13.21□□□□□ -0.29
COL5A1-206ENST00000465877 CSRP2Q16527 193 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 CA9Q16790 459 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 SPDYCQ5MJ68 293 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 LYSMD4Q5XG99 296 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 PRR23CQ6ZRP0 262 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 Q6ZVU0 165 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 GPR161Q8N6U8 529 aaKnown RBP13.21□□□□□ -0.29
COL5A1-206ENST00000465877 FRS2Q8WU20 508 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 CTNNBL1Q8WYA6 563 aaPredicted RBP13.21□□□□□ -0.29
COL5A1-206ENST00000465877 PTPRN2Q92932 1015 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 TOE1Q96GM8 510 aaKnown RBP13.21□□□□□ -0.29
COL5A1-206ENST00000465877 MRFAP1L1Q96HT8 127 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 BTBD6Q96KE9 485 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 HSPA12BQ96MM6 686 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 CHP1Q99653 195 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 PACSIN1Q9BY11 444 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 DHX35Q9H5Z1 703 aaKnown RBP13.21□□□□□ -0.29
COL5A1-206ENST00000465877 RETREG1Q9H6L5 497 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 ITM2CQ9NQX7 267 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 PCSK1NQ9UHG2 260 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 DNAI1Q9UI46 699 aa13.21□□□□□ -0.29
COL5A1-206ENST00000465877 BCLAF3A2AJT9 711 aaKnown RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 EIF3CLB5ME19 914 aaKnown RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 CBX4O00257 560 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 EEF2KO00418 725 aaKnown RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 FGF10O15520 208 aaPredicted RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 RNASEH1O60930 286 aaKnown RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 NDUFS2O75306 463 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 TCF4P15884 667 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 OXTRP30559 389 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 PCK1P35558 622 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 ACVRL1P37023 503 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 ETFBP38117 255 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 PSMD8P48556 350 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 SERPINH1P50454 418 aaKnown RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 LMNB2Q03252 620 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 ACAP1Q15027 740 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 CST6Q15828 149 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 SMTNL2Q2TAL5 461 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 ACCSLQ4AC99 568 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 PLA2G2CQ5R387 149 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 PEAR1Q5VY43 1037 aaPredicted RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 IL31Q6EBC2 164 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 C22orf39Q6P5X5 142 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 LINGO4Q6UY18 593 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 FAM124AQ86V42 546 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 MMAAQ8IVH4 418 aaKnown RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 SLC41A1Q8IVJ1 513 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 STK40Q8N2I9 435 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 NIPA2Q8N8Q9 360 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 TC2NQ8N9U0 490 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 ATP11CQ8NB49 1132 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 KCTD15Q96SI1 283 aaPredicted RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 EIF3CQ99613 913 aaKnown RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 NCAPGQ9BPX3 1015 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 PABPC3Q9H361 631 aaKnown RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 SMOC1Q9H4F8 434 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 CATSPERBQ9H7T0 1116 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 NHEJ1Q9H9Q4 299 aaPredicted RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 SPTLC3Q9NUV7 552 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 WSB2Q9NYS7 404 aaPredicted RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 IP6K2Q9UHH9 426 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 SCML1Q9UN30 329 aa13.2□□□□□ -0.3
COL5A1-206ENST00000465877 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.2□□□□□ -0.3
COL5A1-206ENST00000465877 CACNA1EQ15878 2313 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 K7ERQ8 282 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 MID1O15344 667 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 ZMPSTE24O75844 475 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 ADH1BP00325 375 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 MT-CO1P00395 513 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 IL1R2P27930 398 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 CLCN6P51797 869 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 SLC25A11Q02978 314 aaKnown RBP13.19□□□□□ -0.3
COL5A1-206ENST00000465877 ZNF33AQ06730 810 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 PIGHQ14442 188 aaPredicted RBP13.19□□□□□ -0.3
COL5A1-206ENST00000465877 SF3A2Q15428 464 aaKnown RBP13.19□□□□□ -0.3
COL5A1-206ENST00000465877 DLG2Q15700 870 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 PPP6R3Q5H9R7 873 aaPredicted RBP13.19□□□□□ -0.3
COL5A1-206ENST00000465877 ERMARDQ5T6L9 678 aa13.19□□□□□ -0.3
COL5A1-206ENST00000465877 TCEAL6Q6IPX3 200 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms