RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 BCL2L1Q07817 233 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ARHGAP1Q07960 439 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 KCNA10Q16322 511 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ZNF470Q6ECI4 717 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ALG3Q92685 438 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 INPP5DQ92835 1189 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 TTPALQ9BTX7 342 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ADAM33Q9BZ11 813 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 RNF208Q9H0X6 261 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTCH1-208ENST00000430669 SMIM28A0A1B0GU29 152 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 OR56A5P0C7T3 313 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 TTC30AQ86WT1 665 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 TMPRSS6Q8IU80 811 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 DAW1Q8N136 415 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 PPP1R16AQ96I34 528 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ECSITQ9BQ95 431 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ATP13A3Q9H7F0 1226 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 LNPEPQ9UIQ6 1025 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-208ENST00000430669 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 TPP1O14773 563 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 GCATO75600 419 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 PDHA1P08559 390 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 SLURP2P0DP57 97 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 BGNP21810 368 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 INPP1P49441 399 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 TAS2R40P59535 323 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 TCEAL1Q15170 157 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 WASHC2DQ5SRD0 308 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 C6orf10Q5SRN2 563 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 MTDHQ86UE4 582 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 FAM162AQ96A26 154 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 RUBCNLQ9H714 662 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 VPS45Q9NRW7 570 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 DNAJC16Q9Y2G8 782 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 ARL5CA6NH57 179 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 AKAP10O43572 662 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 FGF1P05230 155 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 MSH3P20585 1137 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 EEF1DP29692 281 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 RPL22P35268 128 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 SKIV2L2P42285 1042 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 AFTPHQ6ULP2 937 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 MOB2Q70IA6 237 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 ASAH2Q9NR71 780 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 GGT7Q9UJ14 662 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 TSR3Q9UJK0 312 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 C22orf31O95567 290 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 CHRNB2P17787 502 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 MMRN1Q13201 1228 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 INTS6LQ5JSJ4 861 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 EEF1DP3Q658K8 133 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 BNC2Q6ZN30 1099 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 PGLYRP2Q96PD5 576 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 PCDHB18PQ96TA0 734 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 SIX2Q9NPC8 291 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 HES2Q9Y543 173 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 MAGEC1O60732 1142 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 ADH1AP07327 375 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 MRPS35P82673 323 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 FBXW10Q5XX13 1052 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 AADACL2Q6P093 401 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 KYQ8NBH2 561 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 TUBGCP3Q96CW5 907 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 CELF6Q96J87 481 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 SPG21Q9NZD8 308 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 RPA3P35244 121 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 LILRA4P59901 499 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 OXNAD1Q96HP4 312 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 HNRNPABQ99729 332 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 NOD2Q9HC29 1040 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 PCDH18Q9HCL0 1135 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 UBP1Q9NZI7 540 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 RNF225M0QZC1 329 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 ATN1P54259 1190 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 IFI35P80217 286 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 NOMO1Q15155 1222 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 SPDYE7PQ495Y7 208 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 DNAJC9Q8WXX5 260 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 ELMO3Q96BJ8 720 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 NAF1Q96HR8 494 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 GBA3Q9H227 469 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 MRPL46Q9H2W6 279 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 NMRK2Q9NPI5 230 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 C5orf60A6NFR6 353 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 KCNK1O00180 336 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 SYNCRIPO60506 623 aaKnown RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 SERPINB5P36952 375 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 ZDHHC20Q5W0Z9 365 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 PRCCQ92733 491 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-208ENST00000430669 ADAMTSL1Q8N6G6 1762 aa11.73□□□□□ -0.53
PTCH1-208ENST00000430669 COL11A2P13942 1736 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 GJB6O95452 261 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 POLR2EP19388 210 aaKnown RBP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 GRK3P35626 688 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 INSCQ1MX18 579 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 OR56A4Q8NGH8 313 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 LZTS3O60299 673 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms