RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PARNO95453 639 aaKnown RBP5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 TM4SF1P30408 202 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 CHRNA5P30532 468 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 ALDH7A1P49419 539 aaKnown RBP5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 THBS3P49746 956 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 HTR6P50406 440 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 NSUN2Q08J23 767 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 DMWDQ09019 674 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 PMS2P11Q13670 270 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 MAPKAPK3Q16644 382 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 PRTGQ2VWP7 1150 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 DEFB115Q30KQ5 88 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 ANXA2RQ3ZCQ2 193 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 FAM209BQ5JX69 171 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 ZNF549Q6P9A3 640 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 ARL14EPQ8N8R7 260 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 ADAMTS15Q8TE58 950 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 LYZL4Q96KX0 146 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 MLXIPQ9HAP2 919 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 CHPF2Q9P2E5 772 aa5.5□□□□□ -1.53
HMGB3P5-201ENST00000428894 MYH14Q7Z406 1995 aaKnown RBP5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 VIRMAQ69YN4 1812 aaKnown RBP5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 TMEM272A0A1B0GTI8 110 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 NCK2O43639 380 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 ZC3H11AO75152 810 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 EPN2O95208 641 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 MYL3P08590 195 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 TRIM27P14373 513 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 TNFSF4P23510 183 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 LIPMQ5VYY2 423 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 FBXO38Q6PIJ6 1188 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 LVRNQ6Q4G3 990 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 C16orf89Q6UX73 402 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 RFX8Q6ZV50 586 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 TTC30AQ86WT1 665 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 RASGRP3Q8IV61 690 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 PELI3Q8N2H9 469 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 BRI3BPQ8WY22 251 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 C8orf48Q96LL4 319 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 CAMK1GQ96NX5 476 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 GPR78Q96P69 363 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 PIMREGQ9BSJ6 248 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 THSD1Q9NS62 852 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 FBXO28Q9NVF7 368 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 AGO2Q9UKV8 859 aaKnown RBP5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 PCDHA12Q9UN75 941 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 B3GNT3Q9Y2A9 372 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 TONSLQ96HA7 1378 aa5.49□□□□□ -1.53
HMGB3P5-201ENST00000428894 PASKQ96RG2 1323 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 USP42Q9H9J4 1324 aaKnown RBP5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 SCN4AP35499 1836 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 PDE4DIPQ5VU43 2346 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 FAM90A8PA6NJQ4 464 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 J3KTA2 159 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 NPC1O15118 1278 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 SGPL1O95470 568 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 FAM90A13PP0C7W8 464 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 FAM90A24PP0C7X0 464 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 HSPA8P11142 646 aaKnown RBP5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 NANOS2P60321 138 aaKnown RBP5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 DDR1Q08345 913 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 CBFBQ13951 182 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 SEMA3AQ14563 771 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 PGM5Q15124 567 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 DLGAP5Q15398 846 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 INPP5JQ15735 1006 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 SLC35G1Q2M3R5 365 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 KLHL22Q53GT1 634 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 B4GALNT4Q76KP1 1039 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 MEPCEQ7L2J0 689 aaKnown RBP5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 DPP9Q86TI2 863 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 WASF1Q92558 559 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 ZNF566Q969W8 418 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 MSI2Q96DH6 328 aaKnown RBP5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 ABHD14AQ9BUJ0 271 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 PRDM16Q9HAZ2 1276 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 ANAPC4Q9UJX5 808 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 COL5A3P25940 1745 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 TIAM2Q8IVF5 1701 aa5.48□□□□□ -1.53
HMGB3P5-201ENST00000428894 KDRP35968 1356 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 KIR2DS5A0A0G2JLQ3 304 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 PNMA6EA0A0J9YXQ4 647 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 KIR2DS3K7RE56 304 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 DHHO43323 396 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 FGF18O76093 207 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 DDNO94850 711 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 SERPINB2P05120 415 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 CBSLP0DN79 551 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 CBSP35520 551 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 CDKN2AP42771 156 aaKnown RBP5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 CRKLP46109 303 aaKnown RBP5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 CSHL1Q14406 222 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 SMTNL2Q2TAL5 461 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 PLEKHO1Q53GL0 409 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 KIAA1161Q6NSJ0 714 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 MSANTD2Q6P1R3 559 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 ZNF474Q6S9Z5 364 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 C2CD5Q86YS7 1000 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 TMEM199Q8N511 208 aa5.47□□□□□ -1.53
HMGB3P5-201ENST00000428894 ACRBPQ8NEB7 543 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms