RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 ZNF394Q53GI3 561 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 BTBD8Q5XKL5 378 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 ABRAXAS1Q6UWZ7 409 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 TRIB2Q92519 343 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 TCF12Q99081 682 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 BEGAINQ9BUH8 593 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 FRMD8P1Q9BZ68 369 aaPredicted RBP13.02□□□□□ -0.33
HERC3-203ENST00000407637 WDR12Q9GZL7 423 aaKnown RBP13.02□□□□□ -0.33
HERC3-203ENST00000407637 MOV10Q9HCE1 1003 aaKnown RBP13.02□□□□□ -0.33
HERC3-203ENST00000407637 TXNDC16Q9P2K2 825 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 SLC9A2Q9UBY0 812 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 ZNF229Q9UJW7 825 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 PCDHB4Q9Y5E5 795 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 PCDHGA8Q9Y5G5 932 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 SCN4AP35499 1836 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 FAM149AA5PLN7 773 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 E7ENX8 843 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 ICMTO60725 284 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 GAS7O60861 476 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 CRYZL1O95825 349 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 APRTP07741 180 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 KDELR1P24390 212 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 AP3M2P53677 418 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 PSME3P61289 254 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 GTF2IP78347 998 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 PHC1P78364 1004 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 RFTN1Q14699 578 aaPredicted RBP13.01□□□□□ -0.33
HERC3-203ENST00000407637 SLC36A3Q495N2 470 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 UBE2UQ5VVX9 321 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 NXNQ6DKJ4 435 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 UGT3A1Q6NUS8 523 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 TMC5Q6UXY8 1006 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 FAM20CQ8IXL6 584 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 MFSD2AQ8NA29 543 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 SPERTQ8NA61 448 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 FNIP1Q8TF40 1166 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 ZFP90Q8TF47 636 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 RAB2BQ8WUD1 216 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 TMEM174Q8WUU8 243 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 MED30Q96HR3 178 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 APBA2Q99767 749 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 TRPC5Q9UL62 973 aaPredicted RBP13.01□□□□□ -0.33
HERC3-203ENST00000407637 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.01□□□□□ -0.33
HERC3-203ENST00000407637 TCRBV3S1A0A5B6 114 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 GOLGA8CPA6NN73 597 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 APOC4-APOC2K7ER74 178 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 HOXC11O43248 304 aaPredicted RBP13.01□□□□□ -0.33
HERC3-203ENST00000407637 UFL1O94874 794 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 APOC2P02655 101 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 ABCB1P08183 1280 aaPredicted RBP13.01□□□□□ -0.33
HERC3-203ENST00000407637 KCNA2P16389 499 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 PRKCAP17252 672 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 MMP8P22894 467 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 SERPINB1P30740 379 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 COPZ1P61923 177 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 SLC25A11Q02978 314 aaKnown RBP13.01□□□□□ -0.33
HERC3-203ENST00000407637 PICALMQ13492 652 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 AQP6Q13520 282 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 GOLM1Q8NBJ4 401 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 TUBA1CQ9BQE3 449 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 SOX17Q9H6I2 414 aaPredicted RBP13.01□□□□□ -0.33
HERC3-203ENST00000407637 GPN2Q9H9Y4 310 aaPredicted RBP13.01□□□□□ -0.33
HERC3-203ENST00000407637 XPNPEP3Q9NQH7 507 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 PRDM11Q9NQV5 511 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 QPCTLQ9NXS2 382 aa13.01□□□□□ -0.33
HERC3-203ENST00000407637 TCAF2A6NFQ2 919 aa13□□□□□ -0.33
HERC3-203ENST00000407637 B4GAT1O43505 415 aa13□□□□□ -0.33
HERC3-203ENST00000407637 TADA2AO75478 443 aa13□□□□□ -0.33
HERC3-203ENST00000407637 PARNO95453 639 aaKnown RBP13□□□□□ -0.33
HERC3-203ENST00000407637 CHRNGP07510 517 aa13□□□□□ -0.33
HERC3-203ENST00000407637 PRKG1Q13976 671 aa13□□□□□ -0.33
HERC3-203ENST00000407637 STILQ15468 1287 aa13□□□□□ -0.33
HERC3-203ENST00000407637 BRDTQ58F21 947 aaPredicted RBP13□□□□□ -0.33
HERC3-203ENST00000407637 TREML2Q5T2D2 321 aa13□□□□□ -0.33
HERC3-203ENST00000407637 CYP4A22Q5TCH4 519 aa13□□□□□ -0.33
HERC3-203ENST00000407637 PARP8Q8N3A8 854 aa13□□□□□ -0.33
HERC3-203ENST00000407637 HCAR2Q8TDS4 363 aa13□□□□□ -0.33
HERC3-203ENST00000407637 TP53INP1Q96A56 240 aa13□□□□□ -0.33
HERC3-203ENST00000407637 KIFC3Q9BVG8 833 aa13□□□□□ -0.33
HERC3-203ENST00000407637 LHPPQ9H008 270 aa13□□□□□ -0.33
HERC3-203ENST00000407637 NEK6Q9HC98 313 aa13□□□□□ -0.33
HERC3-203ENST00000407637 PCDHGA7Q9Y5G6 932 aa13□□□□□ -0.33
HERC3-203ENST00000407637 ARID2Q68CP9 1835 aa13□□□□□ -0.33
HERC3-203ENST00000407637 UNCXA6NJT0 531 aa13□□□□□ -0.33
HERC3-203ENST00000407637 PAPSS1O43252 624 aaPredicted RBP13□□□□□ -0.33
HERC3-203ENST00000407637 SEC14L2O76054 403 aa13□□□□□ -0.33
HERC3-203ENST00000407637 YBX3P16989 372 aaKnown RBP eCLIP13□□□□□ -0.33
HERC3-203ENST00000407637 ACO1P21399 889 aaKnown RBP13□□□□□ -0.33
HERC3-203ENST00000407637 PROZP22891 400 aa13□□□□□ -0.33
HERC3-203ENST00000407637 EEF1B2P24534 225 aaKnown RBP13□□□□□ -0.33
HERC3-203ENST00000407637 ARL1P40616 181 aaPredicted RBP13□□□□□ -0.33
HERC3-203ENST00000407637 UBXN2AP68543 259 aa13□□□□□ -0.33
HERC3-203ENST00000407637 PIGHQ14442 188 aaPredicted RBP13□□□□□ -0.33
HERC3-203ENST00000407637 TAF5Q15542 800 aa13□□□□□ -0.33
HERC3-203ENST00000407637 PRR23BQ6ZRT6 265 aa13□□□□□ -0.33
HERC3-203ENST00000407637 GK5Q6ZS86 529 aa13□□□□□ -0.33
HERC3-203ENST00000407637 GET4Q7L5D6 327 aaPredicted RBP13□□□□□ -0.33
HERC3-203ENST00000407637 TTLL6Q8N841 843 aa13□□□□□ -0.33
HERC3-203ENST00000407637 CMASQ8NFW8 434 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms