RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 USP17L11C9JVI0 530 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 USP17L18D6R9N7 530 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 USP17L22D6RA61 530 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 USP17L17D6RBQ6 530 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 USP17L19D6RCP7 530 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 USP17L20D6RJB6 530 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 FAM13AO94988 1023 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 ARL1P40616 181 aaPredicted RBP9.72□□□□□ -0.85
SF3A3-201ENST00000373019 ECT2LQ008S8 904 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 USP17L24Q0WX57 530 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 CDC20Q12834 499 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 MERTKQ12866 999 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 SUZ12Q15022 739 aaKnown RBP9.72□□□□□ -0.85
SF3A3-201ENST00000373019 DLG2Q15700 870 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 NPTX1Q15818 432 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 KIAA0408Q6ZU52 694 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 EPHX4Q8IUS5 362 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 RAB2BQ8WUD1 216 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 FBXL20Q96IG2 436 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 CALN1Q9BXU9 219 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 RAB20Q9NX57 234 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 SUCOQ9UBS9 1254 aaKnown RBP9.72□□□□□ -0.85
SF3A3-201ENST00000373019 UGT2A1Q9Y4X1 527 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 DYRK3O43781 588 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 KCNK2O95069 426 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 SERPINE1P05121 402 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 NT5C2P49902 561 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 NME5P56597 212 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 ZNF252P-AS1Q0IIN9 211 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 C19orf57Q0VDD7 668 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 HSPA14Q0VDF9 509 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 BFSP2Q13515 415 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 TFDP3Q5H9I0 405 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 SLC51BQ86UW2 128 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 NIM1KQ8IY84 436 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 SLFN12Q8IYM2 578 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 ELMOD2Q8IZ81 293 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 DEPDC4Q8N2C3 294 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 ANKFN1Q8N957 763 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 RP9Q8TA86 221 aaKnown RBP9.72□□□□□ -0.85
SF3A3-201ENST00000373019 CELF1Q92879 486 aaKnown RBP9.72□□□□□ -0.85
SF3A3-201ENST00000373019 LENG9Q96B70 501 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 CFAP36Q96G28 342 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 P2RX7Q99572 595 aaKnown RBP9.72□□□□□ -0.85
SF3A3-201ENST00000373019 WDR12Q9GZL7 423 aaKnown RBP9.72□□□□□ -0.85
SF3A3-201ENST00000373019 PDZD7Q9H5P4 517 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 TESMINQ9Y4I5 508 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 TAF4O00268 1085 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 DDHD2O94830 711 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 FKBP9O95302 570 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 KRT1P04264 644 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 NAGAP17050 411 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 ETV3P41162 512 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 EIF6P56537 245 aaKnown RBP9.72□□□□□ -0.85
SF3A3-201ENST00000373019 RPL7AP62424 266 aaKnown RBP9.72□□□□□ -0.85
SF3A3-201ENST00000373019 LYPD8Q6UX82 237 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 PRR23BQ6ZRT6 265 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 SP8Q8IXZ3 490 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 PARP8Q8N3A8 854 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 ZNF781Q8N8C0 355 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 ZNF280CQ8ND82 737 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 ACTL9Q8TC94 416 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 POMGNT1Q8WZA1 660 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 VMP1Q96GC9 406 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 LHPPQ9H008 270 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 FAM96AQ9H5X1 160 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 ZNF408Q9H9D4 720 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 JMJD4Q9H9V9 463 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.72□□□□□ -0.85
SF3A3-201ENST00000373019 C3orf70A6NLC5 250 aaPredicted RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 TOR1BO14657 336 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 AXIN1O15169 862 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 B4GAT1O43505 415 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 RAD17O75943 681 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 BMP2P12643 396 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 BASP1P80723 227 aaKnown RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 SLC13A2Q13183 592 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 TRIM25Q14258 630 aaKnown RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 NFE2Q16621 373 aaPredicted RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 SMU1Q2TAY7 513 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 OFCC1Q8IZS5 231 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 ASCC1Q8N9N2 400 aaKnown RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 BRSK1Q8TDC3 778 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 CRYGNQ8WXF5 182 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 APBB2Q92870 758 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 DUS3LQ96G46 650 aaKnown RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 RMDN3Q96TC7 470 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 CBWD1Q9BRT8 395 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 DBNDD1Q9H9R9 158 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 C12orf10Q9HB07 376 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 MAGEE1Q9HCI5 957 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 CNOT6Q9ULM6 557 aaKnown RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 PLIN4Q96Q06 1357 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 TCRBV3S1A0A5B6 114 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 PMM2O15305 246 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 TLR3O15455 904 aaKnown RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 PLIN3O60664 434 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 BCAS1O75363 584 aaPredicted RBP9.71□□□□□ -0.85
SF3A3-201ENST00000373019 VAPBO95292 243 aa9.71□□□□□ -0.85
SF3A3-201ENST00000373019 MBL2P11226 248 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms