RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 RWDD4Q6NW29 188 aaKnown RBP28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 SCYL2Q6P3W7 929 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 DSG4Q86SJ6 1040 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 CAPN10Q9HC96 672 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 CAPN11Q9UMQ6 739 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 SNAP91O60641 907 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 RTN2O75298 545 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 RHOQP17081 205 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 ENGP17813 658 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 C5AR1P21730 350 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 PSMD8P48556 350 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 AIF1P55008 147 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 ZBED6P86452 979 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 TDRD12Q587J7 1177 aaKnown RBP28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 DRC7Q8IY82 874 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 ATP11CQ8NB49 1132 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 OR8D1Q8WZ84 308 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 TBC1D31Q96DN5 1066 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 OMDQ99983 421 aa28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 C6orf106Q9H6K1 298 aaPredicted RBP28.3■■■□□ 2.12
ATPAF1-201ENST00000329231 A0A1W2PP55 124 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 FAM72CH0Y354 149 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 CDX4O14627 284 aaPredicted RBP28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 TM4SF5O14894 197 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 LRIG2O94898 1065 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 IL1BP01584 269 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 MAPKAPK2P49137 400 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 ATXN3P54252 364 aaPredicted RBP28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 GNA12Q03113 381 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 EFHC2Q5JST6 749 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 FAM72AQ5TYM5 149 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 FAM72DQ6L9T8 149 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 TMC6Q7Z403 805 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 VPS36Q86VN1 386 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 FAM72BQ86X60 149 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 OR7D4Q8NG98 312 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 CPLX3Q8WVH0 158 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 TRIM11Q96F44 468 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 SPON2Q9BUD6 331 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 MIR1-1HGQ9H1L0 117 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 FZD4Q9ULV1 537 aa28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 LUC7L2Q9Y383 392 aaKnown RBP28.29■■■□□ 2.12
ATPAF1-201ENST00000329231 A0A1B0GTW7 788 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 ALOX15BO15296 676 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 ATMINO43313 823 aaPredicted RBP28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 RNASEH2AO75792 299 aaKnown RBP28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 MT-CO1P00395 513 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 SYPP08247 313 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 SRCP12931 536 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 L1CAMP32004 1257 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 ETFBP38117 255 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 CLCN6P51797 869 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 RETSATQ6NUM9 610 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 Q6ZVU0 165 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 NLRP14Q86W24 1093 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 SNX19Q92543 992 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 ATP13A1Q9HD20 1204 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 TMEM248Q9NWD8 314 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 ADAMTS1Q9UHI8 967 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 EIF2B4Q9UI10 523 aaKnown RBP28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 FARP1Q9Y4F1 1045 aaPredicted RBP28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 PI4KAP42356 2102 aa28.28■■■□□ 2.12
ATPAF1-201ENST00000329231 CBX4O00257 560 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 SERPING1P05155 500 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 MYBL1P10243 752 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 GOT1P17174 413 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 PSMA2P25787 234 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 MAPK8P45983 427 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 OGDHQ02218 1023 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 FAM46CQ5VWP2 391 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 HGSNATQ68CP4 663 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 HDDC3Q8N4P3 179 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 ZNF653Q96CK0 615 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 CCDC114Q96M63 670 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 MAGEB5Q9BZ81 275 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 XPO4Q9C0E2 1151 aaKnown RBP28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 NEUROG2Q9H2A3 272 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 CNOT8Q9UFF9 292 aaKnown RBP28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 SERGEFQ9UGK8 458 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 FZD10Q9ULW2 581 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 ZBTB32Q9Y2Y4 487 aaPredicted RBP28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 SCINQ9Y6U3 715 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 DOCK4Q8N1I0 1966 aa28.27■■■□□ 2.12
ATPAF1-201ENST00000329231 DNAH14Q0VDD8 3507 aa28.26■■■□□ 2.12
ATPAF1-201ENST00000329231 ARHGAP33O14559 1287 aa28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 MCF2LO15068 1137 aa28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 BCAT2O15382 392 aaPredicted RBP28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 SLC20A2Q08357 652 aa28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 LINGO4Q6UY18 593 aa28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 DNAAF5Q86Y56 855 aa28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 ZCCHC9Q8N567 271 aaKnown RBP28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 RNF214Q8ND24 703 aa28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 GTPBP2Q9BX10 602 aaKnown RBP28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 ISCUQ9H1K1 167 aa28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 FSCN3Q9NQT6 498 aa28.26■■■□□ 2.11
ATPAF1-201ENST00000329231 TMEM191CA6NGB0 347 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 LRRC72A6NJI9 287 aa28.25■■■□□ 2.11
ATPAF1-201ENST00000329231 C1QTNF3-AMACRE9PGA6 284 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms