RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 GPRC5DQ9NZD1 345 aa17.7■□□□□ 0.42
CHRNA5-201ENST00000299565 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.7■□□□□ 0.42
CHRNA5-201ENST00000299565 MDM4O15151 490 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 MAPK10P53779 464 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 MPP1Q00013 466 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 NSUN2Q08J23 767 aaKnown RBP eCLIP17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 FAM83EQ2M2I3 478 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 RBM44Q6ZP01 1051 aaKnown RBP17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 FBXW8Q8N3Y1 598 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 SLC35F5Q8WV83 523 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 NUP205Q92621 2012 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 SAC3D1A6NKF1 404 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 FAM72CH0Y354 149 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 TIMM44O43615 452 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 B3GAT3O94766 335 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 XRCC1P18887 633 aaPredicted RBP17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 TFEBP19484 476 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 RPL14P50914 215 aaKnown RBP17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 ZNF280AP59817 542 aaPredicted RBP17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 LSM12Q3MHD2 195 aaKnown RBP17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 FAM72AQ5TYM5 149 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 FAM72DQ6L9T8 149 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 GK5Q6ZS86 529 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 FAM72BQ86X60 149 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 B4GALNT2Q8NHY0 566 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 MAPK15Q8TD08 544 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 CDH19Q9H159 772 aa17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 SARS2Q9NP81 518 aaKnown RBP17.69■□□□□ 0.42
CHRNA5-201ENST00000299565 GIPC1O14908 333 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 UQCRBP14927 111 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 ITGAXP20702 1163 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 CDH13P55290 713 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 PLOD1Q02809 727 aaPredicted RBP17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 DYNC1I2Q13409 638 aaKnown RBP17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 SLC9A4Q6AI14 798 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 LRRC8BQ6P9F7 803 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 ERO1BQ86YB8 467 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 DSELQ8IZU8 1212 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 WNT8BQ93098 351 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 FCRL3Q96P31 734 aaPredicted RBP17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 FTHL17Q9BXU8 183 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 SLC4A5Q9BY07 1137 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 RHOBTB2Q9BYZ6 727 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 ZBTB14O43829 449 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 FAM189A1O60320 539 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 TPSB2P20231 275 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 THOP1P52888 689 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 MAXP61244 160 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 TPSAB1Q15661 275 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 CNPY1Q3B7I2 92 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 PDCD6IPQ8WUM4 868 aaKnown RBP17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 PCDHAC1Q9H158 963 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 TLE6Q9H808 572 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 PIGVQ9NUD9 493 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 CNTN3Q9P232 1028 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 MORF4L1Q9UBU8 362 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 NOD1Q9Y239 953 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 CRYL1Q9Y2S2 319 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 HMX2A2RU54 273 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 SPTLC1O15269 473 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 HDAC3O15379 428 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 CD4P01730 458 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 FESP07332 822 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 HDCP19113 662 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 RAP1GDS1P52306 607 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 ENPEPQ07075 957 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 SLC5A9Q2M3M2 681 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 CCDC153Q494R4 210 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 C9orf57Q5W0N0 161 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 NAPEPLDQ6IQ20 393 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 KLC3Q6P597 504 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 MFN1Q8IWA4 741 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 ANKRD13AQ8IZ07 590 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 LPPQ93052 612 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 NXNL1Q96CM4 212 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 RBPJLQ9UBG7 517 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 AP4B1Q9Y6B7 739 aa17.68■□□□□ 0.42
CHRNA5-201ENST00000299565 YJEFN3A6XGL0 299 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 BEST1O76090 585 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 DDHD2O94830 711 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 BEX3Q00994 111 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 SEMA5AQ13591 1074 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 DPYSL2Q16555 572 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 FUT11Q495W5 492 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 SLC26A9Q7LBE3 791 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 PQLC1Q8N2U9 271 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 GALNT15Q8N3T1 639 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 DCUN1D5Q9BTE7 237 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 UPF3AQ9H1J1 476 aaKnown RBP17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 RBM22Q9NW64 420 aaKnown RBP eCLIP17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 SMIM28A0A1B0GU29 152 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 NCF1BA6NI72 391 aaPredicted RBP17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 NCF1CA8MVU1 366 aaPredicted RBP17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 KLF11O14901 512 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 ADCY6O43306 1168 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 PFKMP08237 780 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 SETSIPP0DME0 302 aa17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 NCF1P14598 390 aaPredicted RBP17.67■□□□□ 0.42
CHRNA5-201ENST00000299565 ME2P23368 584 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms