RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 LRRC8DQ7L1W4 858 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 ACTRT2Q8TDY3 377 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 SNX19Q92543 992 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 IL22Q9GZX6 179 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 LAMA4Q16363 1823 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 FER1L4A9Z1Z3 1794 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 CNTNAP2Q9UHC6 1331 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 FAM95CA0A1B0GW59 222 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 CHRM1P11229 460 aaPredicted RBP14.89□□□□□ -0.03
VPS36-207ENST00000611132 SCNN1BP51168 640 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 KRR1Q13601 381 aaKnown RBP14.89□□□□□ -0.03
VPS36-207ENST00000611132 MAPK11Q15759 364 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 UBAP2Q5T6F2 1119 aaKnown RBP14.89□□□□□ -0.03
VPS36-207ENST00000611132 DEFB106AQ8N104 65 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 SFRP1Q8N474 314 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 CIB1Q99828 191 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 NDFIP2Q9NV92 336 aa14.89□□□□□ -0.03
VPS36-207ENST00000611132 WRAP73Q9P2S5 460 aaPredicted RBP14.89□□□□□ -0.03
VPS36-207ENST00000611132 TYW5A2RUC4 315 aaKnown RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 DLDP09622 509 aaKnown RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 CCNA2P20248 432 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 MPSTP25325 297 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 IREB2P48200 963 aaKnown RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 CBX3Q13185 183 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 ZBTB46Q86UZ6 589 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 LMO3Q8TAP4 145 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 DENND1AQ8TEH3 1009 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 MTG1Q9BT17 334 aaPredicted RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 GPR88Q9GZN0 384 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 SDCBP2Q9H190 292 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 ANAPC2Q9UJX6 822 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 CCDC189A1A4V9 331 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 SNAP91O60641 907 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 C2P06681 752 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 ATP5F1P24539 256 aaPredicted RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 ARPP19P56211 112 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 NAA20P61599 178 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 ADGRE1Q14246 886 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 NADK2Q4G0N4 442 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 TMEM63BQ5T3F8 832 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 FAM43BQ6ZT52 329 aaPredicted RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 PPP1R10Q96QC0 940 aaKnown RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 LGMNQ99538 433 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 C1orf21Q9H246 121 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 PRDM16Q9HAZ2 1276 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 DNAAF2Q9NVR5 837 aaKnown RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 SYBUQ9NX95 663 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 PCDHAC2Q9Y5I4 1007 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 VWA5AO00534 786 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 ERBB2P04626 1255 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 TM4SF1P30408 202 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 BACE1P56817 501 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 DCAF4L1Q3SXM0 396 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 SLC4A11Q8NBS3 891 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 KCTD4Q8WVF5 259 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 CPB2Q96IY4 423 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 RNF112Q9ULX5 631 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 MLNP12872 115 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 ACO1P21399 889 aaKnown RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 SLC18A2Q05940 514 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 TMEM62Q0P6H9 643 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 MTX3Q5HYI7 312 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 PPM1JQ5JR12 505 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 STYK1Q6J9G0 422 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 PDSS2Q86YH6 399 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 APOBEC3FQ8IUX4 373 aaKnown RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 CERKQ8TCT0 537 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 PPP1R14BQ96C90 147 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 MIPEPQ99797 713 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 PRDM12Q9H4Q4 367 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 NOL11Q9H8H0 719 aaKnown RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 CDHR5Q9HBB8 845 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 COMMD8Q9NX08 183 aa14.88□□□□□ -0.03
VPS36-207ENST00000611132 MTF2Q9Y483 593 aaPredicted RBP14.88□□□□□ -0.03
VPS36-207ENST00000611132 BCLAF3A2AJT9 711 aaKnown RBP14.87□□□□□ -0.03
VPS36-207ENST00000611132 CRTAMO95727 393 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 CDC42EP1Q00587 391 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 HERC6Q8IVU3 1022 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 RORBQ92753 470 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 OSBPL6Q9BZF3 934 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 RAD21L1Q9H4I0 556 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 APOBEC3GQ9HC16 384 aaKnown RBP14.87□□□□□ -0.03
VPS36-207ENST00000611132 SELENONQ9NZV5 590 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 PPME1Q9Y570 386 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 A0A087WZ62 844 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 TCRBV7S3A2A0A539 114 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 DHRS12A0PJE2 317 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 PTGES3LE9PB15 166 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 CCNE2O96020 404 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 CST3P01034 146 aaPredicted RBP14.87□□□□□ -0.03
VPS36-207ENST00000611132 CSH1P0DML2 217 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 CSH2P0DML3 217 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 PSMB9P28065 219 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 IL5RAQ01344 420 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 BROXQ5VW32 411 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 METTL7BQ6UX53 244 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 HORMAD1Q86X24 394 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 XYLT1Q86Y38 959 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 AHI1Q8N157 1196 aa14.87□□□□□ -0.03
VPS36-207ENST00000611132 UBR7Q8N806 425 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms