RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 A0A1W2PQC6 194 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 FAM170AA1A519 330 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 ILVBLA1L0T0 632 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 C10orf142B7Z368 130 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 MCF2LO15068 1137 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 OPHN1O60890 802 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 SRGAP2O75044 1071 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 ADH1BP00325 375 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 RHOCP08134 193 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 GOT1P17174 413 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 CD27P26842 260 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 OR1E1P30953 314 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 RFC1P35251 1148 aaPredicted RBP10.8□□□□□ -0.68
CCDC9-203ENST00000596938 STK19P49842 368 aaPredicted RBP10.8□□□□□ -0.68
CCDC9-203ENST00000596938 GALCP54803 685 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 ATP11AP98196 1134 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 NRG1Q02297 640 aaPredicted RBP10.8□□□□□ -0.68
CCDC9-203ENST00000596938 SLC20A2Q08357 652 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 IQCB1Q15051 598 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 DLG2Q15700 870 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 KLHL40Q2TBA0 621 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 UAP1L1Q3KQV9 507 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 ARL13BQ3SXY8 428 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 ALFQ53S48 1182 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 C6orf118Q5T5N4 469 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 SH3PXD2AQ5TCZ1 1133 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 ZNF783Q6ZMS7 281 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 MON1BQ7L1V2 547 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 DSG4Q86SJ6 1040 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 PHLDB2Q86SQ0 1253 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 PIP4P1Q86T03 277 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 FAM131BQ86XD5 332 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 HDDC3Q8N4P3 179 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 MINDY1Q8N5J2 469 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 C3orf20Q8ND61 904 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 JOSD2Q8TAC2 188 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 GANCQ8TET4 914 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 BAP1Q92560 729 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 BIRC7Q96CA5 298 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 VCPIP1Q96JH7 1222 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 SYT11Q9BT88 431 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 C2orf49Q9BVC5 232 aaPredicted RBP10.8□□□□□ -0.68
CCDC9-203ENST00000596938 GTPBP2Q9BX10 602 aaKnown RBP10.8□□□□□ -0.68
CCDC9-203ENST00000596938 MUC3BQ9H195 1237 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 MIR1-1HGQ9H1L0 117 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 NEUROG2Q9H2A3 272 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 FSCN3Q9NQT6 498 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 TMPRSS4Q9NRS4 437 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 MPP6Q9NZW5 540 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 ZNF212Q9UDV6 495 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 SLC25A13Q9UJS0 675 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 HS3ST2Q9Y278 367 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 SNX10Q9Y5X0 201 aa10.8□□□□□ -0.68
CCDC9-203ENST00000596938 A0A1B0GTH6 734 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 CXorf51AA0A1B0GTR3 108 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 TCRBV5S1A1TA0A578 114 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 LRRC72A6NJI9 287 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 ALOX15BO15296 676 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 MID1O15344 667 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 GJB3O75712 270 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 RNASEH2AO75792 299 aaKnown RBP10.79□□□□□ -0.68
CCDC9-203ENST00000596938 IL1BP01584 269 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 IGHV4-34P06331 123 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 VAV1P15498 845 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 NOVA1P51513 510 aaKnown RBP10.79□□□□□ -0.68
CCDC9-203ENST00000596938 CLCN6P51797 869 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 AFF3P51826 1226 aaKnown RBP10.79□□□□□ -0.68
CCDC9-203ENST00000596938 HDAC4P56524 1084 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 NR1I3Q14994 352 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 C15orf59Q2T9L4 293 aaPredicted RBP10.79□□□□□ -0.68
CCDC9-203ENST00000596938 ACCSLQ4AC99 568 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 FAM46CQ5VWP2 391 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 KIAA0895LQ68EN5 471 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 ACAD10Q6JQN1 1059 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 PSAPL1Q6NUJ1 521 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 PPP1R2P3Q6NXS1 205 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 WDR59Q6PJI9 974 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 IL27RAQ6UWB1 636 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 ZCCHC9Q8N567 271 aaKnown RBP10.79□□□□□ -0.68
CCDC9-203ENST00000596938 SH2D3CQ8N5H7 860 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 OR2T34Q8NGX1 318 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 FAM131CQ96AQ9 280 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 NAP1L5Q96NT1 182 aaPredicted RBP10.79□□□□□ -0.68
CCDC9-203ENST00000596938 PSMB7Q99436 277 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 OMDQ99983 421 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 SELENOOQ9BVL4 669 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 EDEM3Q9BZQ6 932 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 ZYG11BQ9C0D3 744 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 KDM4CQ9H3R0 1056 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 SLC32A1Q9H598 525 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 AIPL1Q9NZN9 384 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 OR12D3Q9UGF7 316 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 PPM1HQ9ULR3 514 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 TPX2Q9ULW0 747 aaKnown RBP10.79□□□□□ -0.68
CCDC9-203ENST00000596938 PLXND1Q9Y4D7 1925 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 THADAQ6YHU6 1953 aa10.79□□□□□ -0.68
CCDC9-203ENST00000596938 A0A0D9SEW6 157 aa10.78□□□□□ -0.68
CCDC9-203ENST00000596938 A0A1W2PP55 124 aa10.78□□□□□ -0.68
CCDC9-203ENST00000596938 SLC7A4O43246 635 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms