RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 BAG1Q99933 345 aaPredicted RBP16.16■□□□□ 0.18
USB1-208ENST00000563207 DDX50Q9BQ39 737 aaKnown RBP16.16■□□□□ 0.18
USB1-208ENST00000563207 FAM204AQ9H8W3 233 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 GGA2Q9UJY4 613 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 CFAP47Q6ZTR5 3102 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 ARHGAP33O14559 1287 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 ACSL4O60488 711 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 IPO7O95373 1038 aaKnown RBP16.15■□□□□ 0.18
USB1-208ENST00000563207 CYP1A2P05177 515 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 TMEM253P0C7T8 217 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 PABPC1P11940 636 aaKnown RBP16.15■□□□□ 0.18
USB1-208ENST00000563207 GPD1P21695 349 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 SULT1E1P49888 294 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 ZNF143P52747 638 aaPredicted RBP16.15■□□□□ 0.18
USB1-208ENST00000563207 GALCP54803 685 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 BNC1Q01954 994 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 EIF4HQ15056 248 aaKnown RBP16.15■□□□□ 0.18
USB1-208ENST00000563207 SPA17Q15506 151 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 PLEKHG6Q3KR16 790 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 FNDC3BQ53EP0 1204 aaKnown RBP16.15■□□□□ 0.18
USB1-208ENST00000563207 FSCBQ5H9T9 825 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 BRMS1LQ5PSV4 323 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 DCAF12L1Q5VU92 463 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 MBLAC2Q68D91 279 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 PHLDB2Q86SQ0 1253 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 METTL3Q86U44 580 aaKnown RBP16.15■□□□□ 0.18
USB1-208ENST00000563207 ZCCHC9Q8N567 271 aaKnown RBP16.15■□□□□ 0.18
USB1-208ENST00000563207 ATP6V0D2Q8N8Y2 350 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 CEP76Q8TAP6 659 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 CTNNBL1Q8WYA6 563 aaPredicted RBP16.15■□□□□ 0.18
USB1-208ENST00000563207 CENPIQ92674 756 aaPredicted RBP16.15■□□□□ 0.18
USB1-208ENST00000563207 PRCCQ92733 491 aaPredicted RBP16.15■□□□□ 0.18
USB1-208ENST00000563207 MCEEQ96PE7 176 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 NCAPGQ9BPX3 1015 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 MIR1-1HGQ9H1L0 117 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 IL21RQ9HBE5 538 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 PRSS16Q9NQE7 514 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 LCMT1Q9UIC8 334 aa16.15■□□□□ 0.18
USB1-208ENST00000563207 INTS6Q9UL03 887 aaKnown RBP16.15■□□□□ 0.18
USB1-208ENST00000563207 FAM170AA1A519 330 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 TMEM191CA6NGB0 347 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 EIF3CLB5ME19 914 aaKnown RBP16.14■□□□□ 0.17
USB1-208ENST00000563207 MOCS2O96007 188 aaPredicted RBP16.14■□□□□ 0.17
USB1-208ENST00000563207 ABCB4P21439 1286 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 ACSL1P33121 698 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 RDXP35241 583 aaKnown RBP16.14■□□□□ 0.17
USB1-208ENST00000563207 HOXD12P35452 270 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 CXCR3P49682 368 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 ATXN3P54252 364 aaPredicted RBP16.14■□□□□ 0.17
USB1-208ENST00000563207 RPL7AP62424 266 aaKnown RBP16.14■□□□□ 0.17
USB1-208ENST00000563207 DEUP1Q05D60 604 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 CAMK2GQ13555 558 aaPredicted RBP16.14■□□□□ 0.17
USB1-208ENST00000563207 ACAP1Q15027 740 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 EMC1Q8N766 993 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.14■□□□□ 0.17
USB1-208ENST00000563207 CCDC112Q8NEF3 446 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 JOSD2Q8TAC2 188 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 RNF34Q969K3 372 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 MYO19Q96H55 970 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 BTN2A3PQ96KV6 586 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 CFAP57Q96MR6 1250 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 TBCBQ99426 244 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 EIF3CQ99613 913 aaKnown RBP16.14■□□□□ 0.17
USB1-208ENST00000563207 CNPY3Q9BT09 278 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 THAP2Q9H0W7 228 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 C6orf106Q9H6K1 298 aaPredicted RBP16.14■□□□□ 0.17
USB1-208ENST00000563207 WDCPQ9H6R7 721 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 UVRAGQ9P2Y5 699 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 MYO1AQ9UBC5 1043 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 EPN1Q9Y6I3 576 aaPredicted RBP16.14■□□□□ 0.17
USB1-208ENST00000563207 ZZEF1O43149 2961 aa16.14■□□□□ 0.17
USB1-208ENST00000563207 PCNX2A6NKB5 2137 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 CACNA1BQ00975 2339 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 METTL12A8MUP2 240 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 MEI4A8MW99 385 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 KCNU1A8MYU2 1149 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 NPC1O15118 1278 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 TIMM44O43615 452 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 HYAL3O43820 417 aaPredicted RBP16.13■□□□□ 0.17
USB1-208ENST00000563207 NRDCO43847 1150 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 GJB3O75712 270 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 IGLV3-19P01714 112 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 CTSOP43234 321 aaPredicted RBP16.13■□□□□ 0.17
USB1-208ENST00000563207 GRIK2Q13002 908 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 NME3Q13232 169 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 CCDC14Q49A88 953 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 ZC3H12AQ5D1E8 599 aaKnown RBP16.13■□□□□ 0.17
USB1-208ENST00000563207 TRNP1Q6NT89 227 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 CARNMT1Q8N4J0 409 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 OR2T3Q8NH03 318 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 DNASE2BQ8WZ79 361 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 SCNM1Q9BWG6 230 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 SPTLC3Q9NUV7 552 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 EIF2B4Q9UI10 523 aaKnown RBP16.13■□□□□ 0.17
USB1-208ENST00000563207 RALYQ9UKM9 306 aaKnown RBP16.13■□□□□ 0.17
USB1-208ENST00000563207 TMEM131Q92545 1883 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 CEP295Q9C0D2 2601 aa16.13■□□□□ 0.17
USB1-208ENST00000563207 CACNA1EQ15878 2313 aa16.12■□□□□ 0.17
USB1-208ENST00000563207 ATMINO43313 823 aaPredicted RBP16.12■□□□□ 0.17
USB1-208ENST00000563207 SH3BP5O60239 455 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms