RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 TBL1XO60907 577 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 EPHB2P29323 1055 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 IFNAR2P48551 515 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 PAPOLAP51003 745 aaKnown RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 DNA2P51530 1060 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 PTK6Q13882 451 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 KRT81Q14533 505 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 TAF12Q16514 161 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 MPPE1Q53F39 396 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 SLC45A4Q5BKX6 768 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 LY6G5CQ5SRR4 150 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 B4GALNT4Q76KP1 1039 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 ZNF534Q76KX8 674 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 PRUNE1Q86TP1 453 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 CHSY1Q86X52 802 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 AGGF1Q8N302 714 aaeCLIP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 SLC44A3Q8N4M1 653 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 TDRD5Q8NAT2 981 aaKnown RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 MAFAQ8NHW3 353 aaPredicted RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 C1orf54Q8WWF1 131 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 CALN1Q9BXU9 219 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 SIK2Q9H0K1 926 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 ATP13A1Q9HD20 1204 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 RASA4BC9J798 803 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 CCDC188H7C350 402 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 J3KR12 359 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 RASA4O43374 803 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 RAD51CO43502 376 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 TSPAN3O60637 253 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 GCATO75600 419 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 URI1O94763 535 aaPredicted RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 TYRP14679 529 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 ZFXP17010 805 aaPredicted RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 PSMC3P17980 439 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 CCNCP24863 283 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 TRADDQ15628 312 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 LONRF2Q1L5Z9 754 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 PUS10Q3MIT2 529 aaKnown RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 PARP15Q460N3 678 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 DUPD1Q68J44 220 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 MTSS1LQ765P7 747 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 RFX6Q8HWS3 928 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 FRS2Q8WU20 508 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 LGMNQ99538 433 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 CARD6Q9BX69 1037 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 CATSPERBQ9H7T0 1116 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 KCNK12Q9HB15 430 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 DUS2Q9NX74 493 aaKnown RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 LHX3Q9UBR4 397 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 DNAH14Q0VDD8 3507 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 C5orf60A6NFR6 353 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 NARSO43776 548 aaKnown RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 ETS1P14921 441 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 PTPN3P26045 913 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 TNFRSF8P28908 595 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 EIF2DP41214 584 aaKnown RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 SLC6A11P48066 632 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 GNA12Q03113 381 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 GRM2Q14416 872 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 PDGFRLQ15198 375 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 CYTH1Q15438 398 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 KAZNQ674X7 775 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 C1orf228Q6PIY5 440 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 TMCO3Q6UWJ1 677 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 ZDHHC24Q6UX98 284 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 ADAT2Q7Z6V5 191 aaKnown RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 MAP7D3Q8IWC1 876 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 LZTR1Q8N653 840 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 SPOCK2Q92563 424 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 NXPE3Q969Y0 559 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 WDR83Q9BRX9 315 aaKnown RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 SLC2A11Q9BYW1 496 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 DDX47Q9H0S4 455 aaKnown RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 MAGEH1Q9H213 219 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 ZFP14Q9HCL3 533 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 FBRSL1Q9HCM7 1045 aaKnown RBP6.92□□□□□ -1.3
LINC00517-202ENST00000554257 GDF3Q9NR23 364 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 ZDHHC18Q9NUE0 388 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 SH3BP1Q9Y3L3 701 aa6.92□□□□□ -1.3
LINC00517-202ENST00000554257 DOCK9Q9BZ29 2069 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 PRRT4C9JH25 899 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 K7EQS6 105 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 GJB3O75712 270 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 MAP3K6O95382 1288 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 RBL1P28749 1068 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 CHRNA3P32297 505 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 GJA4P35212 333 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 CHKAP35790 457 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 ARL4AP40617 200 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 CSKP41240 450 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 CTSOP43234 321 aaPredicted RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 MAGEA3P43357 314 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 KCNJ1P48048 391 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 YBEYP58557 167 aaPredicted RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 TFDP2Q14188 446 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 GEN1Q17RS7 908 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 RABGAP1LQ5R372 815 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 PTCRAQ6ISU1 281 aaPredicted RBP6.91□□□□□ -1.3
LINC00517-202ENST00000554257 OTOP3Q7RTS5 596 aa6.91□□□□□ -1.3
LINC00517-202ENST00000554257 TFAP2DQ7Z6R9 452 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms