RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 FGF10O15520 208 aaPredicted RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CTIFO43310 598 aaKnown RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 PROM1O43490 865 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 PRAMEF10O60809 474 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 SEC24AO95486 1093 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 NFATC1O95644 943 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 PLA2G1BP04054 148 aaKnown RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CYP1A1P04798 512 aaPredicted RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 STSP08842 583 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ALPPL2P10696 532 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 NME1P15531 152 aaKnown RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 TCN2P20062 427 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 FGFR4P22455 802 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 SFPQP23246 707 aaKnown RBP eCLIP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 GABRR2P28476 465 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 PPP2R1AP30153 589 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CIITAP33076 1130 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ACVRL1P37023 503 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 OPRD1P41143 372 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 STAT1P42224 750 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 SEPHS1P49903 392 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLC26A2P50443 739 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 TPMTP51580 245 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 STAT5BP51692 787 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ARPP19P56211 112 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CSNK1G2P78368 415 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CDC42EP1Q00587 391 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ROR1Q01973 937 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 TFCP2Q12800 502 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 PLD1Q13393 1074 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 HSP90AA2PQ14568 343 aaPredicted RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ASIC2Q16515 512 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ANKRD39Q53RE8 183 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CRB2Q5IJ48 1285 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 DCAF10Q5QP82 559 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 UBAP2Q5T6F2 1119 aaKnown RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 MEI1Q5TIA1 1274 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 SHEQ5VZ18 495 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CES4AQ5XG92 561 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLC8B1Q6J4K2 584 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 MTFR2Q6P444 385 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 MEX3BQ6ZN04 569 aaKnown RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ETV3LQ6ZN32 361 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ARHGEF18Q6ZSZ5 1173 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 GAREM2Q75VX8 874 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 HIPK1Q86Z02 1210 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 EFCAB13Q8IY85 973 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 IFNL3Q8IZI9 196 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CMTM8Q8IZV2 173 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 IQCKQ8N0W5 287 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 TAB3Q8N5C8 712 aaPredicted RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CISD2Q8N5K1 135 aaKnown RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 LINC00482Q8N8I6 264 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 KYQ8NBH2 561 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CNNM3Q8NE01 707 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 OR4C6Q8NH72 309 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 IFI44Q8TCB0 444 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 DCAF4Q8WV16 495 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 KIAA1143Q96AT1 154 aaPredicted RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 NACC2Q96BF6 587 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 MTFMTQ96DP5 389 aaKnown RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLC6A18Q96N87 628 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 INPP4AQ96PE3 977 aaPredicted RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 GCNAQ96QF7 691 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 SYT3Q9BQG1 590 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLC46A2Q9BY10 475 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 GCOM2Q9BZD3 368 aaPredicted RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 INO80BQ9C086 356 aaPredicted RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 LRRCC1Q9C099 1032 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 B3GNT4Q9C0J1 378 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 KLC2Q9H0B6 622 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ENKD1Q9H0I2 346 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 GZF1Q9H116 711 aaPredicted RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 PDE7BQ9NP56 450 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZDHHC4Q9NPG8 344 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CD93Q9NPY3 652 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 AGPAT4Q9NRZ5 378 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 USP36Q9P275 1121 aaKnown RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 PISDQ9UG56 409 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CDC42EP3Q9UKI2 254 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 PIN4Q9Y237 131 aaKnown RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 POLR3KQ9Y2Y1 108 aaPredicted RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 PCDHGB7Q9Y5F8 929 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLCO1B1Q9Y6L6 691 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CACNA1CQ13936 2221 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 KIAA1549LQ6ZVL6 1849 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZANQ9Y493 2812 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 CPED1A4D0V7 1026 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 MTMR11A4FU01 709 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 H7C1Q1 480 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 SMAD7O15105 426 aaKnown RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 INPP4BO15327 924 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 MAGEB2O15479 319 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ARHGEF9O43307 516 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 TRAPPC3O43617 180 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms