RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ARL13BQ3SXY8 428 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 TRIM61Q5EBN2 209 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 SYCP2LQ5T4T6 812 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 SFMBT2Q5VUG0 894 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 ZNF783Q6ZMS7 281 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 USP30Q70CQ3 517 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 NTAN1Q96AB6 310 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 IQCDQ96DY2 449 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 FAM129BQ96TA1 746 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 EDEM2Q9BV94 578 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 GPR174Q9BXC1 333 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 HAUS4Q9H6D7 363 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 CAPN10Q9HC96 672 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 TAS2R14Q9NYV8 317 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 HS3ST2Q9Y278 367 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 SNX10Q9Y5X0 201 aa17.67■□□□□ 0.42
SFSWAP-205ENST00000537164 SPTBN2O15020 2390 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 METTL12A8MUP2 240 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 GOLGA6L19H0YKK7 550 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 CDX4O14627 284 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 RNASEH1O60930 286 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 SERPINF2P08697 491 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 UBASH3AP57075 661 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 RPL7AP62424 266 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 SCAPQ12770 1279 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 ASIC2Q16515 512 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 CDO1Q16878 200 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 TTC31Q49AM3 519 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 WDR45BQ5MNZ6 344 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 C6orf118Q5T5N4 469 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 DNAJC24Q6P3W2 148 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 ZNF571Q7Z3V5 609 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 DEFB119Q8N690 84 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 FAM172AQ8WUF8 416 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 SYN2Q92777 582 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 PSMB7Q99436 277 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 NUSAP1Q9BXS6 441 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 ZYG11BQ9C0D3 744 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 MPP6Q9NZW5 540 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 OR12D3Q9UGF7 316 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 VPS28Q9UK41 221 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 NCOR2Q9Y618 2525 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 ADAMTS9Q9P2N4 1935 aa17.66■□□□□ 0.42
SFSWAP-205ENST00000537164 CXorf51AA0A1B0GTR3 108 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 ILVBLA1L0T0 632 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 C10orf142B7Z368 130 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 SRGAP2O75044 1071 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 RHOCP08134 193 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 RRM1P23921 792 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 ACSL1P33121 698 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 SFSWAPQ12872 951 aaKnown RBP17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 ELAVL3Q14576 367 aaKnown RBP17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 CST6Q15828 149 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 PLEKHA7Q6IQ23 1121 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 CACUL1Q86Y37 369 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 SH2D3CQ8N5H7 860 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 DCAF4L2Q8NA75 395 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 CNPY3Q9BT09 278 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 C2orf49Q9BVC5 232 aaPredicted RBP17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 BTBD1Q9H0C5 482 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 MUC3BQ9H195 1237 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 PABPC3Q9H361 631 aaKnown RBP17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 SGK2Q9HBY8 427 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 SUSD2Q9UGT4 822 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 ADAMTS1Q9UHI8 967 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 SLC25A13Q9UJS0 675 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 SLC6A14Q9UN76 642 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 NEU3Q9UQ49 428 aa17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 ATXN2Q99700 1313 aaKnown RBP17.65■□□□□ 0.42
SFSWAP-205ENST00000537164 ANKRD62A6NC57 917 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 DDX3XO00571 662 aaKnown RBP eCLIP17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 OR1E1P30953 314 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 AIF1P55008 147 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 KRT83P78385 493 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 KLHL30Q0D2K2 578 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 MAMLD1Q13495 774 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 HGSNATQ68CP4 663 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 TFAP2DQ7Z6R9 452 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 NLRP14Q86W24 1093 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 CCDC185Q8N715 623 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 C1orf216Q8TAB5 229 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 FAM131CQ96AQ9 280 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 MCEEQ96PE7 176 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 TMEM9BQ9NQ34 198 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 PARVAQ9NVD7 372 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 FZD4Q9ULV1 537 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 CAPN11Q9UMQ6 739 aa17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 ASCC3Q8N3C0 2202 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-205ENST00000537164 A0A0D9SEW6 157 aa17.63■□□□□ 0.41
SFSWAP-205ENST00000537164 DCDC2BA2VCK2 349 aa17.63■□□□□ 0.41
SFSWAP-205ENST00000537164 FAM72CH0Y354 149 aa17.63■□□□□ 0.41
SFSWAP-205ENST00000537164 ALOX15BO15296 676 aa17.63■□□□□ 0.41
SFSWAP-205ENST00000537164 CCP110O43303 1012 aa17.63■□□□□ 0.41
SFSWAP-205ENST00000537164 ADH1BP00325 375 aa17.63■□□□□ 0.41
SFSWAP-205ENST00000537164 VAV1P15498 845 aa17.63■□□□□ 0.41
SFSWAP-205ENST00000537164 ENGP17813 658 aa17.63■□□□□ 0.41
SFSWAP-205ENST00000537164 DLG2Q15700 870 aa17.63■□□□□ 0.41
SFSWAP-205ENST00000537164 FAM72AQ5TYM5 149 aa17.63■□□□□ 0.41
SFSWAP-205ENST00000537164 DCAF12L1Q5VU92 463 aa17.63■□□□□ 0.41
SFSWAP-205ENST00000537164 IL31Q6EBC2 164 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms