RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 ATRNL1Q5VV63 1379 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 MYH6P13533 1939 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 SH3BP5O60239 455 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 SLC4A1P02730 911 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 ERBB2P04626 1255 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 C2P06681 752 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 SLC26A2P50443 739 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 CDC42EP1Q00587 391 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 HERC3Q15034 1050 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 ZNF618Q5T7W0 954 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 VWA5B1Q5TIE3 1220 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 FKBP1CQ5VVH2 108 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 FAM183BPQ6ZVS7 135 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 MARVELD2Q8N4S9 558 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 ABHD8Q96I13 439 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 CCDC106Q9BWC9 280 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 RAD21L1Q9H4I0 556 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 CPSF3Q9UKF6 684 aaKnown RBP8.66□□□□□ -1.02
PCM1-212ENST00000519253 NWD2Q9ULI1 1742 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 JCHAINP01591 159 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 BFSP2Q13515 415 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 TRIM25Q14258 630 aaKnown RBP8.66□□□□□ -1.02
PCM1-212ENST00000519253 KCNJ11Q14654 390 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 PLEKHG4Q58EX7 1191 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 TMEM63BQ5T3F8 832 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 BROXQ5VW32 411 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 TIFABQ6ZNK6 161 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 CMC1Q7Z7K0 106 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 CCDC117Q8IWD4 279 aaPredicted RBP8.66□□□□□ -1.02
PCM1-212ENST00000519253 NSMCE2Q96MF7 247 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 FAM49AQ9H0Q0 323 aaPredicted RBP8.66□□□□□ -1.02
PCM1-212ENST00000519253 UNC93B1Q9H1C4 597 aa8.66□□□□□ -1.02
PCM1-212ENST00000519253 TCRBV7S3A2A0A539 114 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 CD48P09326 243 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 COL6A2P12110 1019 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 PSMB4P28070 264 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 NSUN2Q08J23 767 aaKnown RBP eCLIP8.65□□□□□ -1.02
PCM1-212ENST00000519253 TMTC4Q5T4D3 741 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 TTC23Q5W5X9 447 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 SCUBE3Q8IX30 993 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 NRG4Q8WWG1 115 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 CRYGNQ8WXF5 182 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 KCTD14Q9BQ13 255 aaPredicted RBP8.65□□□□□ -1.02
PCM1-212ENST00000519253 ZDHHC7Q9NXF8 308 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 LAMB4A4D0S4 1761 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 FAM159BA6NKW6 160 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 KCNK1O00180 336 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 DHRS4L1P0CG22 281 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 TFEBP19484 476 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 JAK1P23458 1154 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 MAGEA8P43361 318 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 GPR107Q5VW38 600 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 SMYD5Q6GMV2 418 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 DPY19L2P1Q6NXN4 242 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 FAM136AQ96C01 138 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 POPDC2Q9HBU9 364 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 ANAPC2Q9UJX6 822 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 PADI4Q9UM07 663 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 UBQLN1Q9UMX0 589 aaKnown RBP8.65□□□□□ -1.02
PCM1-212ENST00000519253 A0A087X1B8 175 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 ZBTB48P10074 688 aaPredicted RBP8.65□□□□□ -1.02
PCM1-212ENST00000519253 ACO1P21399 889 aaKnown RBP8.65□□□□□ -1.02
PCM1-212ENST00000519253 ZNF135P52742 658 aaPredicted RBP8.65□□□□□ -1.02
PCM1-212ENST00000519253 C1orf220Q5T0J3 134 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 ANKRD13AQ8IZ07 590 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 MIER2Q8N344 545 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 SHCBP1Q8NEM2 672 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 OR52K1Q8NGK4 314 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 CEP41Q9BYV8 373 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 KIF17Q9P2E2 1029 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.65□□□□□ -1.02
PCM1-212ENST00000519253 PHF24Q9UPV7 400 aa8.65□□□□□ -1.02
PCM1-212ENST00000519253 DHRS12A0PJE2 317 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 INAQ16352 499 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 TRMT10BQ6PF06 316 aaKnown RBP8.65□□□□□ -1.03
PCM1-212ENST00000519253 HERC6Q8IVU3 1022 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 MYO1HQ8N1T3 1032 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 DNERQ8NFT8 737 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 APBA2Q99767 749 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 STRA6Q9BX79 667 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 NACA2Q9H009 215 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 CATSPERBQ9H7T0 1116 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 ERAP1Q9NZ08 941 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 SELENONQ9NZV5 590 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 RGPD2P0DJD1 1756 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 VWA5AO00534 786 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 MDM4O15151 490 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 ARHGEF9O43307 516 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 TXNP10599 105 aaKnown RBP8.65□□□□□ -1.03
PCM1-212ENST00000519253 TGFB3P10600 412 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 TCF4P15884 667 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 LIMK2P53671 638 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 TUBA4AP68366 448 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 DCAF4L1Q3SXM0 396 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 FAM98BQ52LJ0 330 aaKnown RBP8.65□□□□□ -1.03
PCM1-212ENST00000519253 METTL7BQ6UX53 244 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 LEMD2Q8NC56 503 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 PDPRQ8NCN5 879 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 HERPUD2Q9BSE4 406 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 GATA5Q9BWX5 397 aaPredicted RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms