RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ZNF215Q9UL58 517 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 USP22Q9UPT9 525 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 FAM50BQ9Y247 325 aa4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 NOSIPQ9Y314 301 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 EDC4Q6P2E9 1401 aaKnown RBP4.94□□□□□ -1.62
HMGB3P13-201ENST00000511263 PNPLA6Q8IY17 1366 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 PARD3Q8TEW0 1356 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 CPS1P31327 1500 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 A1L4Q6 167 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 LINC00473A8K010 186 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 RHPN2P1A8MT19 583 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 EFCAB8A8MWE9 144 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 TTC34A8MYJ7 566 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 M0R3H8 397 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 THAP12O43422 761 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 JTBO76095 146 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 EIF2S1P05198 315 aaKnown RBP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 RHOP08100 348 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 HSPA8P11142 646 aaKnown RBP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 CD19P15391 556 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 TPH1P17752 444 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 LMO1P25800 156 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 HMGB2P26583 209 aaKnown RBP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 PSMC4P43686 418 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 ATXN1P54253 815 aaKnown RBP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 EEFSECP57772 596 aaKnown RBP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 CTAG1AP78358 180 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 BASP1P80723 227 aaKnown RBP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 DMPKQ09013 629 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 BTG3Q14201 252 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 BRD3Q15059 726 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 WDR43Q15061 677 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 RASA2Q15283 850 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 SAFBQ15424 915 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 MAPRE1Q15691 268 aaKnown RBP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 ALDH1L2Q3SY69 923 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 CCDC40Q4G0X9 1142 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 TREML2Q5T2D2 321 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 ARMC3Q5W041 872 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 ADALQ6DHV7 355 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 IL31Q6EBC2 164 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 CCSAPQ6IQ19 270 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 MIS18BP1Q6P0N0 1132 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 TLDC1Q6P9B6 456 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 IZUMO1Q8IYV9 350 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 PAF1Q8N7H5 531 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 SYT2Q8N9I0 419 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 ABHD11Q8NFV4 315 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 XAGE5Q8WWM1 108 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 IP6K1Q92551 441 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 KAT2BQ92831 832 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 SARAFQ96BY9 339 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 OPTNQ96CV9 577 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 RPGRIP1Q96KN7 1286 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 C16orf45Q96MC5 204 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 SPAG5Q96R06 1193 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 CGREF1Q99674 301 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 BRIP1Q9BX63 1249 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 WDR26Q9H7D7 661 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 ADGRL3Q9HAR2 1447 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 PARVBQ9HBI1 364 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 VCX3AQ9NNX9 186 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 GTF3C4Q9UKN8 822 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 PADI4Q9UM07 663 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 SH3GLB1Q9Y371 365 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 ATP7BP35670 1465 aa4.93□□□□□ -1.62
HMGB3P13-201ENST00000511263 RIMS1Q86UR5 1692 aaKnown RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 MST1RQ04912 1400 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 SSH2Q76I76 1423 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 SYCE3A1L190 88 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 DYTNA2CJ06 578 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 LRRD1A4D1F6 860 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 B4DLN1 442 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 APAF1O14727 1248 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 PQBP1O60828 265 aaKnown RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 RASAL1O95294 804 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 IGLV2-14P01704 120 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 LDHCP07864 332 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 VIMP08670 466 aaKnown RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 IL6RP08887 468 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 IDEP14735 1019 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 KCNA3P22001 575 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 PSMA3P25788 255 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 KIF5BP33176 963 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 CYP2C18P33260 490 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 GNL1P36915 607 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 NEK3P51956 506 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 BLVRAP53004 296 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 PMS2P54278 862 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 BCAT1P54687 386 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 CBX3Q13185 183 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 STIM1Q13586 685 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 TRIM71Q2Q1W2 868 aaKnown RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 DEPDC1Q5TB30 811 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 C20orf194Q5TEA3 1177 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 CACHD1Q5VU97 1274 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 SWSAP1Q6NVH7 229 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 CRELD2Q6UXH1 353 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 BRINP3Q76B58 766 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 RNF44Q7L0R7 432 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms