RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 MRPL17Q9NRX2 175 aaKnown RBP14.31□□□□□ -0.12
SCAF4-202ENST00000399804 SYBUQ9NX95 663 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 MIOSQ9NXC5 875 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 DNAJC16Q9Y2G8 782 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 B2RBV5 119 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 RPL17P18621 184 aaKnown RBP14.31□□□□□ -0.12
SCAF4-202ENST00000399804 PGM1P36871 562 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 CD86P42081 329 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 AQP5P55064 265 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 KLF1Q13351 362 aaPredicted RBP14.31□□□□□ -0.12
SCAF4-202ENST00000399804 HERC6Q8IVU3 1022 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 GANCQ8TET4 914 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 FAM167BQ9BTA0 163 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 CYP4F12Q9HCS2 524 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 NENFQ9UMX5 172 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 PCDHA11Q9Y5I1 949 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 BUD23O43709 281 aaKnown RBP14.31□□□□□ -0.12
SCAF4-202ENST00000399804 SNX3O60493 162 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 PYGLP06737 847 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 CSH1P0DML2 217 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 CSH2P0DML3 217 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 TFE3P19532 575 aaPredicted RBP14.31□□□□□ -0.12
SCAF4-202ENST00000399804 CD151P48509 253 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 CSHL1Q14406 222 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 DBN1Q16643 649 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 PDPK2PQ6A1A2 396 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 PTRHD1Q6GMV3 140 aaKnown RBP14.31□□□□□ -0.12
SCAF4-202ENST00000399804 APBB2Q92870 758 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 LATS2Q9NRM7 1088 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 HAO1Q9UJM8 370 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 TCRBV7S3A2A0A539 114 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 C5orf60A6NFR6 353 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 PTGESO14684 152 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 CHUKO15111 745 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 CYBAP13498 195 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 HDCP19113 662 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 SCNN1AP37088 669 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 CERCAMQ5T4B2 595 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 AGAP9Q5VTM2 703 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 ZNF567Q8N184 647 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 CFAP52Q8N1V2 620 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 PIK3R5Q8WYR1 880 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 SUSD3Q96L08 255 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 SERPINI1Q99574 410 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 ILKAPQ9H0C8 392 aaPredicted RBP14.3□□□□□ -0.12
SCAF4-202ENST00000399804 GPAMQ9HCL2 828 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 HACD3Q9P035 362 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 HEATR9A2RTY3 570 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 PHGDHO43175 533 aaKnown RBP14.3□□□□□ -0.12
SCAF4-202ENST00000399804 FAM155BO75949 473 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 METTL18O95568 372 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 APOA4P06727 396 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 DRD4P21917 467 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 NEPROQ6NW34 567 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 OTOP3Q7RTS5 596 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 DDX53Q86TM3 631 aaKnown RBP14.3□□□□□ -0.12
SCAF4-202ENST00000399804 LPCAT1Q8NF37 534 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 ULK4Q96C45 1275 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 PRKD2Q9BZL6 878 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 POLR1EQ9GZS1 481 aaKnown RBP14.3□□□□□ -0.12
SCAF4-202ENST00000399804 UBA2Q9UBT2 640 aaPredicted RBP14.3□□□□□ -0.12
SCAF4-202ENST00000399804 SYN3O14994 580 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 DNAJC6O75061 913 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 GLP2RO95838 553 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 CUL3Q13618 768 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 MOGSQ13724 837 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 ARHGAP15Q53QZ3 475 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 NPAS4Q8IUM7 802 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 ZDHHC14Q8IZN3 488 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 TLCD1Q96CP7 247 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 VCXQ9H320 206 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 EML4Q9HC35 981 aaKnown RBP14.3□□□□□ -0.12
SCAF4-202ENST00000399804 GCATO75600 419 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 FAM163BP0C2L3 166 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 SPATA31D3P0C874 917 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 WEE1P30291 646 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 TLE2Q04725 743 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 ZNF252P-AS1Q0IIN9 211 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 IRF5Q13568 498 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 PCID2Q5JVF3 399 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 SPATA31D4Q6ZUB0 917 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 PRPF39Q86UA1 669 aaKnown RBP14.3□□□□□ -0.12
SCAF4-202ENST00000399804 LONP2Q86WA8 852 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 ZIC5Q96T25 663 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 SEMA3CQ99985 751 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 CD248Q9HCU0 757 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 IL1RAPL1Q9NZN1 696 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 SEPT3Q9UH03 358 aa14.3□□□□□ -0.12
SCAF4-202ENST00000399804 CCDC160A6NGH7 325 aa14.29□□□□□ -0.12
SCAF4-202ENST00000399804 TPP1O14773 563 aa14.29□□□□□ -0.12
SCAF4-202ENST00000399804 BEST1O76090 585 aa14.29□□□□□ -0.12
SCAF4-202ENST00000399804 CRTAMO95727 393 aa14.29□□□□□ -0.12
SCAF4-202ENST00000399804 PTPN7P35236 360 aa14.29□□□□□ -0.12
SCAF4-202ENST00000399804 SERPINH1P50454 418 aaKnown RBP14.29□□□□□ -0.12
SCAF4-202ENST00000399804 ST8SIA6P61647 398 aa14.29□□□□□ -0.12
SCAF4-202ENST00000399804 RAB6CQ53S08 254 aa14.29□□□□□ -0.12
SCAF4-202ENST00000399804 RETSATQ6NUM9 610 aa14.29□□□□□ -0.12
SCAF4-202ENST00000399804 PRSS55Q6UWB4 352 aaPredicted RBP14.29□□□□□ -0.12
SCAF4-202ENST00000399804 KCTD13Q8WZ19 329 aa14.29□□□□□ -0.12
SCAF4-202ENST00000399804 LRGUKQ96M69 825 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms