RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 ZNF669Q96BR6 464 aaPredicted RBP18.27■□□□□ 0.52
CTSA-204ENST00000372484 FCRL3Q96P31 734 aaPredicted RBP18.27■□□□□ 0.52
CTSA-204ENST00000372484 UNC93B1Q9H1C4 597 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 TMEM51Q9NW97 253 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 TXNDC16Q9P2K2 825 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 MAGED2Q9UNF1 606 aaPredicted RBP18.27■□□□□ 0.52
CTSA-204ENST00000372484 TRIM17Q9Y577 477 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 PSAT1Q9Y617 370 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 USH1CQ9Y6N9 552 aa18.27■□□□□ 0.52
CTSA-204ENST00000372484 SCN5AQ14524 2016 aa18.27■□□□□ 0.51
CTSA-204ENST00000372484 ATP9BO43861 1147 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 MAFKO60675 156 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 PBX3P40426 434 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 NRG1Q02297 640 aaPredicted RBP18.26■□□□□ 0.51
CTSA-204ENST00000372484 EFEMP1Q12805 493 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 TCTN1Q2MV58 587 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 MGAT5BQ3V5L5 792 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 TTC31Q49AM3 519 aaPredicted RBP18.26■□□□□ 0.51
CTSA-204ENST00000372484 CERCAMQ5T4B2 595 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 PIK3R6Q5UE93 754 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 NAPEPLDQ6IQ20 393 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 NPAS4Q8IUM7 802 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 RTL3Q8N8U3 475 aaKnown RBP18.26■□□□□ 0.51
CTSA-204ENST00000372484 SLC39A13Q96H72 371 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 C1orf74Q96LT6 269 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 SEPT5Q99719 369 aaPredicted RBP18.26■□□□□ 0.51
CTSA-204ENST00000372484 IL37Q9NZH6 218 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 NYNRINQ9P2P1 1898 aaKnown RBP18.26■□□□□ 0.51
CTSA-204ENST00000372484 HOXA2O43364 376 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 DNAJC8O75937 253 aaPredicted RBP18.26■□□□□ 0.51
CTSA-204ENST00000372484 BGNP21810 368 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 NPY2RP49146 381 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 GALNTL6Q49A17 601 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 TMEM135Q86UB9 458 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.26■□□□□ 0.51
CTSA-204ENST00000372484 ARMC2Q8NEN0 867 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 TSSK1BQ9BXA7 367 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 NPHS2Q9NP85 383 aa18.26■□□□□ 0.51
CTSA-204ENST00000372484 FAM92AA1XBS5 289 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 MTMR11A4FU01 709 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 TBKBP1A7MCY6 615 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 MATN3O15232 486 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 PSMD3O43242 534 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 USP1O94782 785 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 RTN3O95197 1032 aaPredicted RBP18.25■□□□□ 0.51
CTSA-204ENST00000372484 TROVE2P10155 538 aaKnown RBP eCLIP18.25■□□□□ 0.51
CTSA-204ENST00000372484 ALDH3A1P30838 453 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 CRHR1P34998 444 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 CDH17Q12864 832 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 ELAVL2Q12926 359 aaKnown RBP18.25■□□□□ 0.51
CTSA-204ENST00000372484 GPR17Q13304 367 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 RTP2Q5QGT7 225 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 ZNF449Q6P9G9 518 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 RSPO2Q6UXX9 243 aaPredicted RBP18.25■□□□□ 0.51
CTSA-204ENST00000372484 RNF19BQ6ZMZ0 732 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 LINC00523Q86TU6 105 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 PACS2Q86VP3 889 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 CNPY4Q8N129 248 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 SPPL2BQ8TCT7 592 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 SCLYQ96I15 445 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 MRPL9Q9BYD2 267 aaKnown RBP18.25■□□□□ 0.51
CTSA-204ENST00000372484 IL22Q9GZX6 179 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 AAR2Q9Y312 384 aaKnown RBP18.25■□□□□ 0.51
CTSA-204ENST00000372484 MAGEB16A2A368 324 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 AP3B1O00203 1094 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 CACNG3O60359 315 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 TBX18O95935 607 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 ALDOAP04075 364 aaKnown RBP18.25■□□□□ 0.51
CTSA-204ENST00000372484 GALTP07902 379 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 TPH1P17752 444 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 OVGP1Q12889 678 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 TAF10Q12962 218 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 SETDB1Q15047 1291 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 ANKRD20A4Q4UJ75 823 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 TIGD7Q6NT04 549 aaPredicted RBP18.25■□□□□ 0.51
CTSA-204ENST00000372484 MIB1Q86YT6 1006 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 SPATA22Q8NHS9 363 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 C10orf82Q8WW14 230 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 ZNF419Q96HQ0 510 aaPredicted RBP18.25■□□□□ 0.51
CTSA-204ENST00000372484 IL12RB2Q99665 862 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 CRISPLD1Q9H336 500 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 TLR8Q9NR97 1041 aaKnown RBP18.25■□□□□ 0.51
CTSA-204ENST00000372484 CLIC5Q9NZA1 410 aa18.25■□□□□ 0.51
CTSA-204ENST00000372484 GREB1Q4ZG55 1949 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 DOCK4Q8N1I0 1966 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.24■□□□□ 0.51
CTSA-204ENST00000372484 ITGA2BP08514 1039 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 PAPOLAP51003 745 aaKnown RBP18.24■□□□□ 0.51
CTSA-204ENST00000372484 PDE1BQ01064 536 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 CCDC15Q0P6D6 951 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 BNIP1Q12981 228 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 TMEM173Q86WV6 379 aaPredicted RBP18.24■□□□□ 0.51
CTSA-204ENST00000372484 CRIPAKQ8N1N5 446 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 ACMSDQ8TDX5 336 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 MFSD3Q96ES6 412 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 DEFB118Q96PH6 123 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 LRRC37BQ96QE4 947 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 CPNE1Q99829 537 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 MECRQ9BV79 373 aa18.24■□□□□ 0.51
CTSA-204ENST00000372484 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms