RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 DR1Q01658 176 aa11.22□□□□□ -0.61
BRCC3-204ENST00000369462 GNA12Q03113 381 aa11.22□□□□□ -0.61
BRCC3-204ENST00000369462 SMAD2Q15796 467 aaKnown RBP11.22□□□□□ -0.61
BRCC3-204ENST00000369462 SLC45A4Q5BKX6 768 aa11.22□□□□□ -0.61
BRCC3-204ENST00000369462 CXorf57Q6NSI4 855 aaKnown RBP11.22□□□□□ -0.61
BRCC3-204ENST00000369462 ATPAF2Q8N5M1 289 aa11.22□□□□□ -0.61
BRCC3-204ENST00000369462 FAM71DQ8N9W8 422 aa11.22□□□□□ -0.61
BRCC3-204ENST00000369462 CCDC26Q8TAB7 109 aa11.22□□□□□ -0.61
BRCC3-204ENST00000369462 RSAD2Q8WXG1 361 aa11.22□□□□□ -0.61
BRCC3-204ENST00000369462 ATP2A3Q93084 1043 aa11.22□□□□□ -0.61
BRCC3-204ENST00000369462 HINFPQ9BQA5 517 aa11.22□□□□□ -0.61
BRCC3-204ENST00000369462 PHF7Q9BWX1 381 aaPredicted RBP11.22□□□□□ -0.61
BRCC3-204ENST00000369462 DENND4AQ7Z401 1863 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 ILVBLA1L0T0 632 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 OTOL1A6NHN0 477 aaPredicted RBP11.21□□□□□ -0.61
BRCC3-204ENST00000369462 TTI1O43156 1089 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 NFATC1O95644 943 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 ACVRL1P37023 503 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 NRLP54845 237 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 HTR4Q13639 388 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 LEXMQ3ZCV2 418 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 PARP15Q460N3 678 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 RNF219Q5W0B1 726 aaPredicted RBP11.21□□□□□ -0.61
BRCC3-204ENST00000369462 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
BRCC3-204ENST00000369462 MAATS1Q7Z4T9 603 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 NAT16Q8N8M0 369 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 OR7D4Q8NG98 312 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 MAFAQ8NHW3 353 aaPredicted RBP11.21□□□□□ -0.61
BRCC3-204ENST00000369462 SPON2Q9BUD6 331 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 TRMT61BQ9BVS5 477 aaKnown RBP11.21□□□□□ -0.61
BRCC3-204ENST00000369462 MUC3BQ9H195 1237 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 MAGEH1Q9H213 219 aa11.21□□□□□ -0.61
BRCC3-204ENST00000369462 ARHGAP42A6NI28 874 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 KCNK1O00180 336 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 KCNN4O15554 427 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 ECEL1O95672 775 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 ADH1CP00326 375 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 RHOXF2BP0C7M4 288 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 GDI1P31150 447 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 GDF10P55107 478 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 SLC7A5Q01650 507 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 LMNB2Q03252 620 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 PPIDQ08752 370 aaKnown RBP11.21□□□□□ -0.62
BRCC3-204ENST00000369462 PDGFRLQ15198 375 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 HEATR6Q6AI08 1181 aaKnown RBP11.21□□□□□ -0.62
BRCC3-204ENST00000369462 IL31Q6EBC2 164 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 PRUNE1Q86TP1 453 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 CDKL3Q8IVW4 592 aaPredicted RBP11.21□□□□□ -0.62
BRCC3-204ENST00000369462 GRK7Q8WTQ7 553 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 HDAC11Q96DB2 347 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 QKIQ96PU8 341 aaKnown RBP eCLIP11.21□□□□□ -0.62
BRCC3-204ENST00000369462 RHOXF2Q9BQY4 288 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 ECT2Q9H8V3 914 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 USP29Q9HBJ7 922 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 PRDM6Q9NQX0 595 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 LIMD1Q9UGP4 676 aa11.21□□□□□ -0.62
BRCC3-204ENST00000369462 IPO11Q9UI26 975 aaKnown RBP11.21□□□□□ -0.62
BRCC3-204ENST00000369462 BCLAF3A2AJT9 711 aaKnown RBP11.2□□□□□ -0.62
BRCC3-204ENST00000369462 HACD1B0YJ81 288 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 ANHXE9PGG2 379 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 MAFKO60675 156 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 ADH5P11766 374 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 VAV1P15498 845 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 MZF1P28698 734 aaPredicted RBP11.2□□□□□ -0.62
BRCC3-204ENST00000369462 STIP1P31948 543 aaKnown RBP11.2□□□□□ -0.62
BRCC3-204ENST00000369462 PTGIRP43119 386 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 SERINC3Q13530 473 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 DHX34Q14147 1143 aaKnown RBP11.2□□□□□ -0.62
BRCC3-204ENST00000369462 PPP1R7Q15435 360 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 TRIP13Q15645 432 aaPredicted RBP11.2□□□□□ -0.62
BRCC3-204ENST00000369462 LRRC49Q8IUZ0 686 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 ALLCQ8N6M5 410 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 GLIS1Q8NBF1 620 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 FIBINQ8TAL6 211 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 TTC8Q8TAM2 541 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 UBXN4Q92575 508 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 ARHGEF2Q92974 986 aaKnown RBP11.2□□□□□ -0.62
BRCC3-204ENST00000369462 RUNDC3BQ96NL0 473 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 FEM1AQ9BSK4 669 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 BRD8Q9H0E9 1235 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 HPS4Q9NQG7 708 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 GTSE1Q9NYZ3 720 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 MARK1Q9P0L2 795 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 SEPT10Q9P0V9 454 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 J3KR12 359 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 CHADO15335 359 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 GAS8O95995 478 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 ETS1P14921 441 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 GAD2Q05329 585 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 PRKD1Q15139 912 aaPredicted RBP11.2□□□□□ -0.62
BRCC3-204ENST00000369462 ERCC6LQ2NKX8 1250 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 RNF43Q68DV7 783 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 JAMLQ86YT9 394 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 CCDC89Q8N998 374 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 HTR3CQ8WXA8 447 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 TRIM51Q9BSJ1 452 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 EPC1Q9H2F5 836 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 ATP13A1Q9HD20 1204 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 ABCB8Q9NUT2 735 aa11.2□□□□□ -0.62
BRCC3-204ENST00000369462 VPS28Q9UK41 221 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms