RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 C5orf67F2Z3F1 127 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 F5H423 210 aaPredicted RBP18.56■□□□□ 0.56
VIM-201ENST00000224237 STC2O76061 302 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 JCHAINP01591 159 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 CCNB1P14635 433 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 ATP5DP30049 168 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 SSTR1P30872 391 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 MAPKAPK2P49137 400 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 PAPOLAP51003 745 aaKnown RBP18.56■□□□□ 0.56
VIM-201ENST00000224237 MAGOHP61326 146 aaKnown RBP18.56■□□□□ 0.56
VIM-201ENST00000224237 FAM133BQ5BKY9 247 aaKnown RBP18.56■□□□□ 0.56
VIM-201ENST00000224237 TNFAIP8L3Q5GJ75 292 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 EMC10Q5UCC4 262 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 KDM7AQ6ZMT4 941 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 ELMOD1Q8N336 334 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 ARFGAP2Q8N6H7 521 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 MRPL43Q8N983 215 aaKnown RBP18.56■□□□□ 0.56
VIM-201ENST00000224237 SPPL3Q8TCT6 385 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 KLF16Q9BXK1 252 aaPredicted RBP18.56■□□□□ 0.56
VIM-201ENST00000224237 NOL6Q9H6R4 1146 aaKnown RBP18.56■□□□□ 0.56
VIM-201ENST00000224237 IL21Q9HBE4 155 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 ZNF212Q9UDV6 495 aa18.56■□□□□ 0.56
VIM-201ENST00000224237 GOLGA6L7A0A1B0GV03 622 aa18.55■□□□□ 0.56
VIM-201ENST00000224237 CORO1AP31146 461 aaKnown RBP18.55■□□□□ 0.56
VIM-201ENST00000224237 CD68P34810 354 aaPredicted RBP18.55■□□□□ 0.56
VIM-201ENST00000224237 MAGEA10P43363 369 aaPredicted RBP18.55■□□□□ 0.56
VIM-201ENST00000224237 SHHQ15465 462 aa18.55■□□□□ 0.56
VIM-201ENST00000224237 SKIDA1Q1XH10 827 aa18.55■□□□□ 0.56
VIM-201ENST00000224237 ANO4Q32M45 955 aa18.55■□□□□ 0.56
VIM-201ENST00000224237 LRRC8BQ6P9F7 803 aa18.55■□□□□ 0.56
VIM-201ENST00000224237 DENND1CQ8IV53 801 aa18.55■□□□□ 0.56
VIM-201ENST00000224237 LGI2Q8N0V4 545 aa18.55■□□□□ 0.56
VIM-201ENST00000224237 TRPC7Q9HCX4 862 aa18.55■□□□□ 0.56
VIM-201ENST00000224237 FETUBQ9UGM5 382 aa18.55■□□□□ 0.56
VIM-201ENST00000224237 AP2A1O95782 977 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 OLFM2O95897 454 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 CA3P07451 260 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 MBL2P11226 248 aaPredicted RBP18.54■□□□□ 0.56
VIM-201ENST00000224237 SLC6A4P31645 630 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 HPDP32754 393 aaPredicted RBP18.54■□□□□ 0.56
VIM-201ENST00000224237 IRS1P35568 1242 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 PARP15Q460N3 678 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 RABGAP1LQ5R372 815 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 IGDCC3Q8IVU1 814 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 AGGF1Q8N302 714 aaeCLIP18.54■□□□□ 0.56
VIM-201ENST00000224237 FATE1Q969F0 183 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 IL12RB2Q99665 862 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 LGALS13Q9UHV8 139 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 IPO11Q9UI26 975 aaKnown RBP18.54■□□□□ 0.56
VIM-201ENST00000224237 RASA4BC9J798 803 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 GRM6O15303 877 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 RASA4O43374 803 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 LPXNO60711 386 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 RAMP2O60895 175 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 RB1P06400 928 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 NFKB1P19838 968 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 GABRR2P28476 465 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 OR1E1P30953 314 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 YBEYP58557 167 aaPredicted RBP18.54■□□□□ 0.56
VIM-201ENST00000224237 SKOR1P84550 965 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 PRPSAP1Q14558 356 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 KLHL38Q2WGJ6 581 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 TDRPQ86YL5 185 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 TMC8Q8IU68 726 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 MRPS31Q92665 395 aaKnown RBP18.54■□□□□ 0.56
VIM-201ENST00000224237 HMCESQ96FZ2 354 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 DDX50Q9BQ39 737 aaKnown RBP18.54■□□□□ 0.56
VIM-201ENST00000224237 GORASP1Q9BQQ3 440 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 ACSS3Q9H6R3 686 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 GKN1Q9NS71 199 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 RABGEF1Q9UJ41 708 aa18.54■□□□□ 0.56
VIM-201ENST00000224237 CACNG3O60359 315 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 SUN1O94901 812 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 LATS1O95835 1130 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 CPP00450 1065 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 KLKB1P03952 638 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 GRIA1P42261 906 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 CAMK1Q14012 370 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 RTL10Q7L3V2 364 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 TAOK1Q7L7X3 1001 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 CIR1Q86X95 450 aaPredicted RBP18.53■□□□□ 0.56
VIM-201ENST00000224237 CNTD1Q8N815 330 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 MAML1Q92585 1016 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 ABHD8Q96I13 439 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 SIGLEC10Q96LC7 697 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 PPP1R2P1Q96PQ5 205 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 EURLQ9NYK6 297 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 ZC3H7BQ9UGR2 993 aaKnown RBP18.53■□□□□ 0.56
VIM-201ENST00000224237 SLC24A2Q9UI40 661 aa18.53■□□□□ 0.56
VIM-201ENST00000224237 GSTA2P09210 222 aa18.52■□□□□ 0.56
VIM-201ENST00000224237 IRF1P10914 325 aa18.52■□□□□ 0.56
VIM-201ENST00000224237 CDC25CP30307 473 aa18.52■□□□□ 0.56
VIM-201ENST00000224237 MMP13P45452 471 aa18.52■□□□□ 0.56
VIM-201ENST00000224237 CLCN4P51793 760 aa18.52■□□□□ 0.56
VIM-201ENST00000224237 CDH4P55283 916 aa18.52■□□□□ 0.56
VIM-201ENST00000224237 PPP2R2AP63151 447 aa18.52■□□□□ 0.56
VIM-201ENST00000224237 POLD3Q15054 466 aaPredicted RBP18.52■□□□□ 0.56
VIM-201ENST00000224237 RASA2Q15283 850 aa18.52■□□□□ 0.56
VIM-201ENST00000224237 ADGRF1Q5T601 910 aa18.52■□□□□ 0.56
VIM-201ENST00000224237 KCTD11Q693B1 232 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms