RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 CALCOCO2Q13137 446 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 NAA25Q14CX7 972 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 CYP1B1Q16678 543 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 CCDC38Q502W7 563 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 FBXW10Q5XX13 1052 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 C16orf46Q6P387 395 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 PALB2Q86YC2 1186 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 RBM12BQ8IXT5 1001 aaKnown RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 CACNA2D3Q8IZS8 1091 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 TMEM130Q8N3G9 435 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 SPATA17Q96L03 361 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 DDX23Q9BUQ8 820 aaKnown RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 TMEM109Q9BVC6 243 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 NUP85Q9BW27 656 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 VPS11Q9H270 941 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 HCSTQ9UBK5 93 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 CACNG4Q9UBN1 327 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 DNAJB4Q9UDY4 337 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 NR2E1Q9Y466 385 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 MAP4K5Q9Y4K4 846 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 SPEF1Q9Y4P9 236 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 FNDC1Q4ZHG4 1894 aaPredicted RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 TRIP11Q15643 1979 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 C5orf60A6NFR6 353 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 PIRO00625 290 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 MTSS1O43312 755 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 B4GALT3O60512 393 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 CST3P01034 146 aaPredicted RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 ALDH2P05091 517 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 RARGP13631 454 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 COILP38432 576 aaPredicted RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 PTGIRP43119 386 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 ALDH7A1P49419 539 aaKnown RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 TAF6P49848 677 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 RABGGTBP53611 331 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 MYL6P60660 151 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 CDR2Q01850 454 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 ZBTB16Q05516 673 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 LBRQ14739 615 aaKnown RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 UPP1Q16831 310 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 ZNF423Q2M1K9 1284 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 SGSM1Q2NKQ1 1148 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 ZNF699Q32M78 642 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 SV2CQ496J9 727 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 C5orf22Q49AR2 442 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 MRM1Q6IN84 353 aaKnown RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 TAOK1Q7L7X3 1001 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 SLC13A5Q86YT5 568 aaPredicted RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 ANKS4BQ8N8V4 417 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 PRELID2Q8N945 189 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 FBXO30Q8TB52 745 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 RAPGEF5Q92565 580 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 ZNF653Q96CK0 615 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 C18orf8Q96DM3 657 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 HPDLQ96IR7 371 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 COLEC11Q9BWP8 271 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 ROPN1BQ9BZX4 212 aaPredicted RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 CWH43Q9H720 699 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 ROPN1Q9HAT0 212 aaPredicted RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 NOCTQ9UK39 431 aaKnown RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 C19orf53Q9UNZ5 99 aaPredicted RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 PRG3Q9Y2Y8 225 aaPredicted RBP11.92□□□□□ -0.5
LINC00538-201ENST00000626109 ZNF711Q9Y462 761 aa11.92□□□□□ -0.5
LINC00538-201ENST00000626109 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.91□□□□□ -0.5
LINC00538-201ENST00000626109 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.91□□□□□ -0.5
LINC00538-201ENST00000626109 A6NLC8 198 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 GRXCR1A8MXD5 290 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 UBXN8O00124 270 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 PPEF2O14830 753 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 FSCN2O14926 492 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 CYP26A1O43174 497 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 RFPL3O75679 317 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 B3GAT3O94766 335 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 CYP11B1P15538 503 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 SLC11A1P49279 550 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 BCAR1P56945 870 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 GPR85P60893 370 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 SSPNQ14714 243 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 FOXB2Q5VYV0 432 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 FAM109BQ6ICB4 259 aaPredicted RBP11.91□□□□□ -0.5
LINC00538-201ENST00000626109 ACAD10Q6JQN1 1059 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 DCLRE1AQ6PJP8 1040 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 C6orf89Q6UWU4 347 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 GBP7Q8N8V2 638 aaPredicted RBP11.91□□□□□ -0.5
LINC00538-201ENST00000626109 C12orf50Q8NA57 414 aaPredicted RBP11.91□□□□□ -0.5
LINC00538-201ENST00000626109 FBXO25Q8TCJ0 367 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 SEMA4DQ92854 862 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 USP13Q92995 863 aaPredicted RBP11.91□□□□□ -0.5
LINC00538-201ENST00000626109 CD101Q93033 1021 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 KIAA1191Q96A73 305 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 CHMP6Q96FZ7 201 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 ZNF558Q96NG5 402 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 PCDHB18PQ96TA0 734 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 PAAF1Q9BRP4 392 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 ZPBPQ9BS86 351 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 HOMER3Q9NSC5 361 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 GPRC5BQ9NZH0 403 aa11.91□□□□□ -0.5
LINC00538-201ENST00000626109 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms