RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 HUS1O60921 280 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 FKBP6O75344 327 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 HSPA4LO95757 839 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 AMHP03971 560 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 CD1EP15812 388 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 TPH1P17752 444 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 CRABP2P29373 138 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 NOS2P35228 1153 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 HARS2P49590 506 aaKnown RBP12.07□□□□□ -0.48
C11orf54-215ENST00000617482 NAB1Q13506 487 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 CUL3Q13618 768 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 CFAP157Q5JU67 520 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 SPANXN3Q5MJ09 141 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 CERCAMQ5T4B2 595 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 LPCAT4Q643R3 524 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 OSTM1Q86WC4 334 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 ACVR1CQ8NER5 493 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 GPRC5AQ8NFJ5 357 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 SLC7A14Q8TBB6 771 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 CMTM5Q96DZ9 223 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 RBBP8Q99708 897 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 GORASP1Q9BQQ3 440 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 DUSP16Q9BY84 665 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 LRRC4Q9HBW1 653 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 ANLNQ9NQW6 1124 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 SPATS2LQ9NUQ6 558 aaKnown RBP12.07□□□□□ -0.48
C11orf54-215ENST00000617482 DDX43Q9NXZ2 648 aaKnown RBP12.07□□□□□ -0.48
C11orf54-215ENST00000617482 IGSF9Q9P2J2 1179 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 CDH22Q9UJ99 828 aa12.07□□□□□ -0.48
C11orf54-215ENST00000617482 A0A096LPK6 155 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 CCDC78A2IDD5 438 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 ZBTB24O43167 697 aaPredicted RBP12.06□□□□□ -0.48
C11orf54-215ENST00000617482 BUD23O43709 281 aaKnown RBP12.06□□□□□ -0.48
C11orf54-215ENST00000617482 ZBTB14O43829 449 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 CD4P01730 458 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 LYNP07948 512 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 MMP3P08254 477 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 GNAT1P11488 350 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 ERCC2P18074 760 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 SAT1P21673 171 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 PTPN3P26045 913 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 SPRP35270 261 aaPredicted RBP12.06□□□□□ -0.48
C11orf54-215ENST00000617482 TAF6P49848 677 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 MAP3K7CLP57077 242 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 CCNIQ14094 377 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 DPYSQ14117 519 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 PPP2R5DQ14738 602 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 SLC9B1Q4ZJI4 515 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 CTU1Q7Z7A3 348 aaKnown RBP12.06□□□□□ -0.48
C11orf54-215ENST00000617482 SIX6OS1Q8N1H7 587 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.06□□□□□ -0.48
C11orf54-215ENST00000617482 OR6J1Q8NGC5 347 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 EMID1Q96A84 441 aaPredicted RBP12.06□□□□□ -0.48
C11orf54-215ENST00000617482 CDCA5Q96FF9 252 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 TNIP3Q96KP6 325 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 NPY6RQ99463 290 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 EBF3Q9H4W6 596 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 LRRC40Q9H9A6 602 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 CHRAC1Q9NRG0 131 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 GDAP2Q9NXN4 497 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 UBP1Q9NZI7 540 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 CACNG4Q9UBN1 327 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 DNAJB4Q9UDY4 337 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 ADAMTS6Q9UKP5 1117 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 GOLGA8QA0A0J9YX86 632 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 GOLGA8OA6NCC3 632 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 GOLGA8NF8WBI6 632 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 I6L893 689 aaPredicted RBP12.06□□□□□ -0.48
C11orf54-215ENST00000617482 NRP1O14786 923 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 DCLK1O15075 740 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 CCNT2O60583 730 aaKnown RBP12.06□□□□□ -0.48
C11orf54-215ENST00000617482 DAB1O75553 588 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 ITGAXP20702 1163 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 SERPINB6P35237 376 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 GJA5P36382 358 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 LILRA4P59901 499 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 PAFAH1B3Q15102 231 aaKnown RBP12.06□□□□□ -0.48
C11orf54-215ENST00000617482 DGKDQ16760 1214 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 CCDC153Q494R4 210 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 PSTKQ8IV42 348 aaKnown RBP12.06□□□□□ -0.48
C11orf54-215ENST00000617482 MAPK15Q8TD08 544 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 ACTRT2Q8TDY3 377 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 TMEM40Q8WWA1 233 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 NT5C3BQ969T7 300 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 TUBGCP5Q96RT8 1024 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 MED10Q9BTT4 135 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 KATNBL1Q9H079 304 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 PAPOLBQ9NRJ5 636 aaKnown RBP12.06□□□□□ -0.48
C11orf54-215ENST00000617482 BFARQ9NZS9 450 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 PACSIN3Q9UKS6 424 aa12.06□□□□□ -0.48
C11orf54-215ENST00000617482 ZCWPW2A0A1B0GU75 182 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.05□□□□□ -0.48
C11orf54-215ENST00000617482 G3V2L1 256 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 LTFP02788 710 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 NPR3P17342 541 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 ADRA1BP35368 520 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 SERPINB8P50452 374 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 LIMK2P53671 638 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 ANKRD20A4Q4UJ75 823 aa12.05□□□□□ -0.48
C11orf54-215ENST00000617482 AAGABQ6PD74 315 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms