RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 CDK5RAP1Q96SZ6 601 aaKnown RBP12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 RNF208Q9H0X6 261 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 MYLK2Q9H1R3 596 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 CAPN10Q9HC96 672 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 NMRK1Q9NWW6 199 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 UBA2Q9UBT2 640 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 APPL1Q9UKG1 709 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 FAM50BQ9Y247 325 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 LZTS1Q9Y250 596 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 TRIM17Q9Y577 477 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 M0R3G1 203 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 NOL4O94818 638 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 GPC1P35052 558 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 CCNG1P51959 295 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 STARD3Q14849 445 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 PGS1Q32NB8 556 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 ZCWPW2Q504Y3 356 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 SPDYCQ5MJ68 293 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 OSGEPL1Q9H4B0 414 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 NXF3Q9H4D5 531 aaKnown RBP12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 GIMAP4Q9NUV9 329 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
TNFAIP3-206ENST00000612899 MGAT4DA6NG13 374 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 PIGNO95427 931 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 CPSF4O95639 269 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 SLC2A4P14672 509 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 ERCC2P18074 760 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 GSCP56915 257 aaPredicted RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 BOP1Q14137 746 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 MREGQ8N565 214 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 CKAP2Q8WWK9 683 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 COL20A1Q9P218 1284 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 ST3GAL5Q9UNP4 418 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 ZMYM2Q9UBW7 1377 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 MAGEA13PA6NCF6 341 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 SLC15A5A6NIM6 579 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 RBAK-RBAKDNI3L0D1 243 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 SNX3O60493 162 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 USP1O94782 785 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 ATP6V1G2O95670 118 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 CST3P01034 146 aaPredicted RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 ZNF7P17097 686 aaPredicted RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 NFKB1P19838 968 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 KLRC2P26717 231 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 TNFRSF8P28908 595 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 MAP2K5Q13163 448 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 PTPN20Q4JDL3 420 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 RIPOR1Q6ZS17 1223 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 ZBTB49Q6ZSB9 765 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 PALB2Q86YC2 1186 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 METTL6Q8TCB7 284 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 BTBD10Q9BSF8 475 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 POLR1EQ9GZS1 481 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 IMPAD1Q9NX62 359 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 BCL9LQ86UU0 1499 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 MYO5BQ9ULV0 1848 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 TPP1O14773 563 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 HNRNPRO43390 633 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 FSBPO95073 299 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 APOA1P02647 267 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 HIRAP54198 1017 aaPredicted RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 NPY5RQ15761 445 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 RAP1GAP2Q684P5 730 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 LBX2Q6XYB7 198 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 KYAT3Q6YP21 454 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 TRIM48Q8IWZ4 208 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 MRPL9Q9BYD2 267 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 B3GNT5Q9BYG0 378 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 TMEM39AQ9NV64 488 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 SELENONQ9NZV5 590 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 SEPT3Q9UH03 358 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 CDV3Q9UKY7 258 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 FKBP6O75344 327 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 CD52P31358 61 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 SKIV2L2P42285 1042 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 RFX3P48380 749 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 SERPINH1P50454 418 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 PLD1Q13393 1074 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 KPNB1Q14974 876 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 POLNQ7Z5Q5 900 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 NKX2-3Q8TAU0 364 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 ART4Q93070 314 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 IL22Q9GZX6 179 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 ITM2BQ9Y287 266 aa12.73□□□□□ -0.37
TNFAIP3-206ENST00000612899 BTN3A1O00481 513 aa12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 ITGAVP06756 1048 aa12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 OCM2P0CE71 109 aa12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 OCMP0CE72 109 aaPredicted RBP12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 CKBP12277 381 aa12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 PSMC3P17980 439 aa12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 ATP6V1B2P21281 511 aa12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 MMP8P22894 467 aa12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 MRPS6P82932 125 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 DNAJC14Q6Y2X3 702 aaPredicted RBP12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 SNX32Q86XE0 403 aa12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 RMND5AQ9H871 391 aa12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 ERVK-5Q9HDB9 667 aa12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 TMEM191CA6NGB0 347 aa12.72□□□□□ -0.37
TNFAIP3-206ENST00000612899 ZNF682O95780 498 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms