RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 SPARCP09486 303 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 EGR2P11161 476 aaPredicted RBP5.51□□□□□ -1.53
LINC00397-202ENST00000606785 CYP2C18P33260 490 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 FOLR3P41439 243 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 EIF3BP55884 814 aaKnown RBP5.51□□□□□ -1.53
LINC00397-202ENST00000606785 SLC37A1P57057 533 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 NLRP5P59047 1200 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 CFHR3Q02985 330 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 CHAF1BQ13112 559 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 BYSLQ13895 437 aaKnown RBP5.51□□□□□ -1.53
LINC00397-202ENST00000606785 ERCC6LQ2NKX8 1250 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 DUSP28Q4G0W2 176 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 KIAA0895LQ68EN5 471 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 ZNF585AQ6P3V2 769 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 MTFR2Q6P444 385 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 GJB7Q6PEY0 223 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 KIRREL2Q6UWL6 708 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 PRRT2Q7Z6L0 340 aaPredicted RBP5.51□□□□□ -1.53
LINC00397-202ENST00000606785 BRSK2Q8IWQ3 736 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 ADGRF3Q8IZF5 1079 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 ASB2Q96Q27 587 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 AIFM2Q9BRQ8 373 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 ANP32EQ9BTT0 268 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 FSD1LQ9BXM9 530 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 AP1M1Q9BXS5 423 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 SERTAD4Q9NUC0 356 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 DLL3Q9NYJ7 618 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 SLC25A13Q9UJS0 675 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 SNX8Q9Y5X2 465 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 CENPVL1A0A0U1RR11 272 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 A0A1W2PRQ8 180 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 TTC34A8MYJ7 566 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 PTGES3LE9PB15 166 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 DNTTP04053 509 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 NPSP0C0P6 89 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 CSH1P0DML2 217 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 CSH2P0DML3 217 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 PKMP14618 531 aaKnown RBP5.5□□□□□ -1.53
LINC00397-202ENST00000606785 ENGP17813 658 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 NFKBIAP25963 317 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 NDUFS1P28331 727 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 ICAM3P32942 547 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 GJC1P36383 396 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 HADHAP40939 763 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 STAT6P42226 847 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 MTNR1AP48039 350 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 WDR5P61964 334 aaKnown RBP5.5□□□□□ -1.53
LINC00397-202ENST00000606785 EFNB1P98172 346 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 NEXNQ0ZGT2 675 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 GAB1Q13480 694 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 BECN1Q14457 450 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 SLC9B1Q4ZJI4 515 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 ABHD17BQ5VST6 288 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 NAPEPLDQ6IQ20 393 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 ANKRD16Q6P6B7 361 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 RRM2BQ7LG56 351 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 KRT74Q7RTS7 529 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 SZRD1Q7Z422 152 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 VPS52Q8N1B4 723 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 LINC01465Q8N7H1 131 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 IL17DQ8TAD2 202 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 TFAP2BQ92481 460 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 KLHL29Q96CT2 875 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 KAZALD1Q96I82 304 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 Q96MF0 132 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 NAP1L5Q96NT1 182 aaPredicted RBP5.5□□□□□ -1.53
LINC00397-202ENST00000606785 PIP5K1AQ99755 562 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 SLF1Q9BQI6 1058 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 THAP7Q9BT49 309 aaPredicted RBP5.5□□□□□ -1.53
LINC00397-202ENST00000606785 TMPRSS5Q9H3S3 457 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 SEMA5BQ9P283 1151 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 NFKBIL1Q9UBC1 381 aaPredicted RBP5.5□□□□□ -1.53
LINC00397-202ENST00000606785 HDAC6Q9UBN7 1215 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 LIMA1Q9UHB6 759 aaKnown RBP5.5□□□□□ -1.53
LINC00397-202ENST00000606785 ZNF215Q9UL58 517 aaPredicted RBP5.5□□□□□ -1.53
LINC00397-202ENST00000606785 ADAMTS5Q9UNA0 930 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 TMEM5Q9Y2B1 443 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 KCNE2Q9Y6J6 123 aa5.5□□□□□ -1.53
LINC00397-202ENST00000606785 PIPSLA2A3N6 862 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 C16orf96A6NNT2 1141 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 DSCR3O14972 297 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 CHRM4P08173 479 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 ADRB1P08588 477 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 ALDOCP09972 364 aaKnown RBP5.49□□□□□ -1.53
LINC00397-202ENST00000606785 SFPQP23246 707 aaKnown RBP eCLIP5.49□□□□□ -1.53
LINC00397-202ENST00000606785 FPR3P25089 353 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 PSMB10P40306 273 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 CTCFP49711 727 aaPredicted RBP5.49□□□□□ -1.53
LINC00397-202ENST00000606785 OAZ1P54368 228 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 SHC2P98077 582 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 EPS8Q12929 822 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 IL13RA2Q14627 380 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 CNGA3Q16281 694 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 AP5B1Q2VPB7 878 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 RNASE12Q5GAN4 147 aaKnown RBP5.49□□□□□ -1.53
LINC00397-202ENST00000606785 SPECC1Q5M775 1068 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 ARMC3Q5W041 872 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 C1orf210Q8IVY1 113 aa5.49□□□□□ -1.53
LINC00397-202ENST00000606785 SRBD1Q8N5C6 995 aaKnown RBP5.49□□□□□ -1.53
LINC00397-202ENST00000606785 PLD5Q8N7P1 536 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms