RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ANO4Q32M45 955 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 TUBB8Q3ZCM7 444 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 RABGAP1LQ5R372 815 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 FNBP1LQ5T0N5 605 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 RAP1GAP2Q684P5 730 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 LILRA6Q6PI73 481 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 NLRP14Q86W24 1093 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 PALM2Q8IXS6 379 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 ZNF567Q8N184 647 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 RIBC1Q8N443 379 aaPredicted RBP14.13□□□□□ -0.15
TPM1-215ENST00000558868 FATE1Q969F0 183 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 ZBTB9Q96C00 473 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 CELF6Q96J87 481 aaKnown RBP14.13□□□□□ -0.15
TPM1-215ENST00000558868 SAMD11Q96NU1 681 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 PRMT1Q99873 361 aaKnown RBP14.13□□□□□ -0.15
TPM1-215ENST00000558868 TCF25Q9BQ70 676 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 VPS37BQ9H9H4 285 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 BCCIPQ9P287 314 aaKnown RBP eCLIP14.13□□□□□ -0.15
TPM1-215ENST00000558868 TLDC2A0PJX2 215 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 AP3B1O00203 1094 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 MATN3O15232 486 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 FGF19O95750 216 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 GLUD1P00367 558 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 OAS1P00973 400 aaKnown RBP14.12□□□□□ -0.15
TPM1-215ENST00000558868 AGTP01019 485 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 SYN1P17600 705 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 PFKLP17858 780 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 TACR2P21452 398 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 YBEYP58557 167 aaPredicted RBP14.12□□□□□ -0.15
TPM1-215ENST00000558868 IFI35P80217 286 aaPredicted RBP14.12□□□□□ -0.15
TPM1-215ENST00000558868 C5orf22Q49AR2 442 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 TEX44Q53QW1 395 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 FAXCQ5TGI0 409 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 FBXL22Q6P050 247 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 ARHGAP12Q8IWW6 846 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 MRPL43Q8N983 215 aaKnown RBP14.12□□□□□ -0.15
TPM1-215ENST00000558868 KREMEN2Q8NCW0 462 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 FBXO36Q8NEA4 188 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 UHMK1Q8TAS1 419 aaKnown RBP14.12□□□□□ -0.15
TPM1-215ENST00000558868 LRRN4Q8WUT4 740 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 RPRD1AQ96P16 312 aaPredicted RBP14.12□□□□□ -0.15
TPM1-215ENST00000558868 GCNAQ96QF7 691 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 SLC39A8Q9C0K1 460 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 GBA3Q9H227 469 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 TLR9Q9NR96 1032 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 FETUBQ9UGM5 382 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 RSPH14Q9UHP6 348 aa14.12□□□□□ -0.15
TPM1-215ENST00000558868 LAMA3Q16787 3333 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 LINC01553A4QN01 128 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 C5orf67F2Z3F1 127 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 KCNK1O00180 336 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 NEBLO76041 1014 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 F11P03951 625 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 C8AP07357 584 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 CDC25CP30307 473 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 KLHL38Q2WGJ6 581 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 PARP15Q460N3 678 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 ARTNQ5T4W7 220 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 EMC10Q5UCC4 262 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 PDE12Q6L8Q7 609 aaKnown RBP14.11□□□□□ -0.15
TPM1-215ENST00000558868 CCNJLQ8IV13 435 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 TP53INP2Q8IXH6 220 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 SPPL3Q8TCT6 385 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 NSMCE1Q8WV22 266 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 MRPS31Q92665 395 aaKnown RBP14.11□□□□□ -0.15
TPM1-215ENST00000558868 TEKT5Q96M29 485 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 KLF16Q9BXK1 252 aaPredicted RBP14.11□□□□□ -0.15
TPM1-215ENST00000558868 LRRC4CQ9HCJ2 640 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 HAUS2Q9NVX0 235 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 MPP6Q9NZW5 540 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 ADAM21Q9UKJ8 722 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.11□□□□□ -0.15
TPM1-215ENST00000558868 TEX264Q9Y6I9 313 aa14.11□□□□□ -0.15
TPM1-215ENST00000558868 EXOC1LA0A1B0GW35 172 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 LCHNA4D1U4 455 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 C2orf71A6NGG8 1288 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 MAFKO60675 156 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 CDH16O75309 829 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 STC2O76061 302 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 CPP00450 1065 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 JCHAINP01591 159 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 MBL2P11226 248 aaPredicted RBP14.1□□□□□ -0.15
TPM1-215ENST00000558868 CCNB1P14635 433 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 NR1D1P20393 614 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 PSMB4P28070 264 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 ELK3P41970 407 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 MAGEA3P43357 314 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 MMP13P45452 471 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 PAPOLAP51003 745 aaKnown RBP14.1□□□□□ -0.15
TPM1-215ENST00000558868 KCNQ1P51787 676 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 GAD2Q05329 585 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 NR1H3Q13133 447 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 FASTKD3Q14CZ7 662 aaKnown RBP14.1□□□□□ -0.15
TPM1-215ENST00000558868 MSS51Q4VC12 460 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 PPM1LQ5SGD2 360 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 TTC39BQ5VTQ0 682 aaPredicted RBP14.1□□□□□ -0.15
TPM1-215ENST00000558868 KCTD16Q68DU8 428 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 LRRC8BQ6P9F7 803 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 ELMSAN1Q6PJG2 1045 aa14.1□□□□□ -0.15
TPM1-215ENST00000558868 KDM7AQ6ZMT4 941 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms