RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 C1orf127Q8N9H9 656 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 VPS37AQ8NEZ2 397 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 ZNF510Q9Y2H8 683 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 PAGE1O75459 146 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 CHI3L1P36222 383 aaPredicted RBP17.68■□□□□ 0.42
PTPN21-208ENST00000556564 DPYSL3Q14195 570 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 CEP68Q76N32 757 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 SLC26A11Q86WA9 606 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 PHF13Q86YI8 300 aaPredicted RBP17.68■□□□□ 0.42
PTPN21-208ENST00000556564 OR6K2Q8NGY2 324 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 PHF21BQ96EK2 531 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 MLPHQ9BV36 600 aaPredicted RBP17.68■□□□□ 0.42
PTPN21-208ENST00000556564 CATSPERZQ9NTU4 200 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 ZNHIT2Q9UHR6 403 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 CHUKO15111 745 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 CORO1AP31146 461 aaKnown RBP17.68■□□□□ 0.42
PTPN21-208ENST00000556564 GPC1P35052 558 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 WASP42768 502 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 RPL21P46778 160 aaKnown RBP17.68■□□□□ 0.42
PTPN21-208ENST00000556564 MYCBPAPQ8TBZ2 947 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 NRDE2Q9H7Z3 1164 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 MAN1C1Q9NR34 630 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 TMEM51Q9NW97 253 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 TMEM161AQ9NX61 479 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 GNG14A0A1W2PPG7 69 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 LBX1P52954 281 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 SMARCB1Q12824 385 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 TRIM60Q495X7 471 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 VARS2Q5ST30 1063 aaKnown RBP17.68■□□□□ 0.42
PTPN21-208ENST00000556564 NEUROG2Q9H2A3 272 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 STX18Q9P2W9 335 aaKnown RBP17.68■□□□□ 0.42
PTPN21-208ENST00000556564 ARHGAP26Q9UNA1 814 aa17.68■□□□□ 0.42
PTPN21-208ENST00000556564 FAM32AQ9Y421 112 aaKnown RBP17.68■□□□□ 0.42
PTPN21-208ENST00000556564 MGEA5O60502 916 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 CYP3A5P20815 502 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 AP2B1P63010 937 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 GALNT3Q14435 633 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 PSRC1Q6PGN9 363 aaPredicted RBP17.67■□□□□ 0.42
PTPN21-208ENST00000556564 ZNF438Q7Z4V0 828 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 MAGED4Q96JG8 741 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 EPN3Q9H201 632 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 V9GYQ6 96 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 DUOX1Q9NRD9 1551 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 C10orf71Q711Q0 1435 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 MEI4A8MW99 385 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 PPP1R37O75864 691 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 GPR1P46091 355 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 SEC13P55735 322 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 DNAJC3Q13217 504 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 ZNF792Q3KQV3 632 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 KCNV2Q8TDN2 545 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 CCDC126Q96EE4 140 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 PRKD2Q9BZL6 878 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 WRAP73Q9P2S5 460 aaPredicted RBP17.67■□□□□ 0.42
PTPN21-208ENST00000556564 NCALDP61601 193 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 CRADDP78560 199 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 PARP6Q2NL67 630 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 C11orf74Q86VG3 221 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 OR52K1Q8NGK4 314 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 FAR2Q96K12 515 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 ATP4AP20648 1035 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 MEA1Q16626 185 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 GRTP1Q5TC63 336 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 MTSS1LQ765P7 747 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 NLRP9Q7RTR0 991 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 C12orf56Q8IXR9 622 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 PCYOX1LQ8NBM8 494 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 FCRL2Q96LA5 508 aaPredicted RBP17.67■□□□□ 0.42
PTPN21-208ENST00000556564 ESRRGP62508 458 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 PRUNE1Q86TP1 453 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 C7orf43Q8WVR3 580 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 VAT1Q99536 393 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 DTNAQ9Y4J8 743 aa17.67■□□□□ 0.42
PTPN21-208ENST00000556564 GLI1P08151 1106 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 RBP1P09455 135 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 NFKB1P19838 968 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 PDE1CQ14123 709 aaPredicted RBP17.66■□□□□ 0.42
PTPN21-208ENST00000556564 ARID3BQ8IVW6 561 aaPredicted RBP17.66■□□□□ 0.42
PTPN21-208ENST00000556564 ZNF473Q8WTR7 871 aaKnown RBP17.66■□□□□ 0.42
PTPN21-208ENST00000556564 APODP05090 189 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 PECAM1P16284 738 aaPredicted RBP17.66■□□□□ 0.42
PTPN21-208ENST00000556564 PRKCIP41743 596 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 SLC44A2Q8IWA5 706 aaPredicted RBP17.66■□□□□ 0.42
PTPN21-208ENST00000556564 KREMEN1Q96MU8 473 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 ACTR8Q9H981 624 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 NDRG2Q9UN36 371 aaKnown RBP17.66■□□□□ 0.42
PTPN21-208ENST00000556564 OCM2P0CE71 109 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 OCMP0CE72 109 aaPredicted RBP17.66■□□□□ 0.42
PTPN21-208ENST00000556564 GPM6BQ13491 265 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 FAM228AQ86W67 206 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 BCAS3Q9H6U6 928 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 SYN3O14994 580 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 CILPO75339 1184 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 CNTFP26441 200 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 PSTKQ8IV42 348 aaKnown RBP17.66■□□□□ 0.42
PTPN21-208ENST00000556564 JOSD2Q8TAC2 188 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 AUTS2Q8WXX7 1259 aa17.66■□□□□ 0.42
PTPN21-208ENST00000556564 NAF1Q96HR8 494 aaKnown RBP17.66■□□□□ 0.42
PTPN21-208ENST00000556564 USP15Q9Y4E8 981 aaPredicted RBP17.66■□□□□ 0.42
PTPN21-208ENST00000556564 ZNF536O15090 1300 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms