RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 OR8D1Q8WZ84 308 aa17.49■□□□□ 0.39
VPS29-204ENST00000548259 NAF1Q96HR8 494 aaKnown RBP17.49■□□□□ 0.39
VPS29-204ENST00000548259 TRIM62Q9BVG3 475 aa17.49■□□□□ 0.39
VPS29-204ENST00000548259 TJP2Q9UDY2 1190 aa17.49■□□□□ 0.39
VPS29-204ENST00000548259 CYTH4Q9UIA0 394 aa17.49■□□□□ 0.39
VPS29-204ENST00000548259 TLR6Q9Y2C9 796 aa17.49■□□□□ 0.39
VPS29-204ENST00000548259 MUC22E2RYF6 1773 aaPredicted RBP17.48■□□□□ 0.39
VPS29-204ENST00000548259 O00370 1275 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 CETN3O15182 167 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 SART1O43290 800 aaKnown RBP17.48■□□□□ 0.39
VPS29-204ENST00000548259 SIGLEC6O43699 453 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 RNGTTO60942 597 aaKnown RBP17.48■□□□□ 0.39
VPS29-204ENST00000548259 RHOBTB3O94955 611 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 APOEP02649 317 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 TBXAS1P24557 533 aaPredicted RBP17.48■□□□□ 0.39
VPS29-204ENST00000548259 OXCT1P55809 520 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 CCDC15Q0P6D6 951 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 STILQ15468 1287 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 EDRF1Q3B7T1 1238 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 MS4A13Q5J8X5 152 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 TCERG1LQ5VWI1 586 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 KANSL1Q7Z3B3 1105 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 SPATS2Q86XZ4 545 aaKnown RBP17.48■□□□□ 0.39
VPS29-204ENST00000548259 KCNE4Q8WWG9 221 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 KLHDC7BQ96G42 594 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 PRICKLE1Q96MT3 831 aaPredicted RBP17.48■□□□□ 0.39
VPS29-204ENST00000548259 DPH1Q9BZG8 443 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 ABCG4Q9H172 646 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 CLMPQ9H6B4 373 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 THSD1Q9NS62 852 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 SLCO3A1Q9UIG8 710 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 MAPK8IP1Q9UQF2 711 aa17.48■□□□□ 0.39
VPS29-204ENST00000548259 C10orf142B7Z368 130 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 C1QTNF3-AMACRE9PGA6 284 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 SDC3O75056 442 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 ZSCAN22P10073 491 aaPredicted RBP17.47■□□□□ 0.39
VPS29-204ENST00000548259 MAT2AP31153 395 aaKnown RBP17.47■□□□□ 0.39
VPS29-204ENST00000548259 DUSP3P51452 185 aaPredicted RBP17.47■□□□□ 0.39
VPS29-204ENST00000548259 PPP2CBP62714 309 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 PPP2CAP67775 309 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 GABREP78334 506 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 DCAF6Q58WW2 860 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 ARHGAP40Q5TG30 622 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 NADSYN1Q6IA69 706 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 LCLAT1Q6UWP7 414 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 TRIM69Q86WT6 500 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 CFAP52Q8N1V2 620 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 OR4C6Q8NH72 309 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 PTPRN2Q92932 1015 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 CCDC34Q96HJ3 373 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 RPL10LQ96L21 214 aaKnown RBP17.47■□□□□ 0.39
VPS29-204ENST00000548259 HSFY1Q96LI6 401 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 SLC12A6Q9UHW9 1150 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 TENM4Q6N022 2769 aa17.47■□□□□ 0.39
VPS29-204ENST00000548259 NEMP2A6NFY4 417 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 B8ZZF3 427 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 TRIM38O00635 465 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 KLK10O43240 276 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 PLRG1O43660 514 aaKnown RBP17.46■□□□□ 0.39
VPS29-204ENST00000548259 DXOO77932 396 aaKnown RBP17.46■□□□□ 0.39
VPS29-204ENST00000548259 MOCS2O96007 188 aaPredicted RBP17.46■□□□□ 0.39
VPS29-204ENST00000548259 PAEPP09466 180 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 C6P13671 934 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 ZNF18P17022 549 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 CTSOP43234 321 aaPredicted RBP17.46■□□□□ 0.39
VPS29-204ENST00000548259 LSSP48449 732 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 RGS7P49802 495 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 MCCD1P59942 119 aaPredicted RBP17.46■□□□□ 0.39
VPS29-204ENST00000548259 KCNC4Q03721 635 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 DCAF17Q5H9S7 520 aaPredicted RBP17.46■□□□□ 0.39
VPS29-204ENST00000548259 FSCBQ5H9T9 825 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 MMS22LQ6ZRQ5 1243 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 CCDC97Q96F63 343 aaPredicted RBP17.46■□□□□ 0.39
VPS29-204ENST00000548259 HIC2Q96JB3 615 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 NUCKS1Q9H1E3 243 aaKnown RBP17.46■□□□□ 0.39
VPS29-204ENST00000548259 POLR1BQ9H9Y6 1135 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 USP29Q9HBJ7 922 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 PREBQ9HCU5 417 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 KLHL11Q9NVR0 708 aa17.46■□□□□ 0.39
VPS29-204ENST00000548259 M0QYV0 167 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 OPA1O60313 960 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 USP12O75317 370 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 F13A1P00488 732 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 MPOP05164 745 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 GP1BAP07359 652 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 HSP90AA1P07900 732 aaKnown RBP17.45■□□□□ 0.38
VPS29-204ENST00000548259 CKMT1AP12532 417 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 PFKFB1P16118 471 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 DGKAP23743 735 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 CMA1P23946 247 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 DRD3P35462 400 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 VAC14Q08AM6 782 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 CNGA2Q16280 664 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 TTC39BQ5VTQ0 682 aaPredicted RBP17.45■□□□□ 0.38
VPS29-204ENST00000548259 PCSK4Q6UW60 755 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 CHSY1Q86X52 802 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 LGI2Q8N0V4 545 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 SLC35F5Q8WV83 523 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 RNF34Q969K3 372 aa17.45■□□□□ 0.38
VPS29-204ENST00000548259 FAM149B1Q96BN6 582 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms