RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 IL1BP01584 269 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 CD68P34810 354 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-214ENST00000540113 DAOAP59103 153 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 PAFAH1B3Q15102 231 aaKnown RBP11.79□□□□□ -0.52
C11orf54-214ENST00000540113 TIFABQ6ZNK6 161 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 MAVSQ7Z434 540 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 FAM35AQ86V20 835 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 SLC25A41Q8N5S1 370 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 ENDOVQ8N8Q3 282 aaKnown RBP11.79□□□□□ -0.52
C11orf54-214ENST00000540113 SOCS4Q8WXH5 440 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 CERS2Q96G23 380 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 NAF1Q96HR8 494 aaKnown RBP11.79□□□□□ -0.52
C11orf54-214ENST00000540113 SYT15Q9BQS2 421 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 WWP1Q9H0M0 922 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 RCOR3Q9P2K3 495 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-214ENST00000540113 FAM155AB1AL88 458 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-214ENST00000540113 PGK1P00558 417 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 POLBP06746 335 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 PDHA1P08559 390 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 MLNP12872 115 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 SAT1P21673 171 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 SCNN1GP51170 649 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 MXRA7P84157 204 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 PEX6Q13608 980 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 CCDC6Q16204 474 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 HSP90AA5PQ58FG0 334 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 GNASQ5JWF2 1037 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 AGMOQ6ZNB7 445 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 STRA8Q7Z7C7 330 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 DCLK2Q8N568 766 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 MTG1Q9BT17 334 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-214ENST00000540113 THTPAQ9BU02 230 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 MLPHQ9BV36 600 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-214ENST00000540113 CCDC106Q9BWC9 280 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 DNAI2Q9GZS0 605 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 AGO3Q9H9G7 860 aaKnown RBP11.79□□□□□ -0.52
C11orf54-214ENST00000540113 CHRAC1Q9NRG0 131 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 THAP1Q9NVV9 213 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 GEMIN8Q9NWZ8 242 aaKnown RBP11.79□□□□□ -0.52
C11orf54-214ENST00000540113 TXNDC16Q9P2K2 825 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 WASF2Q9Y6W5 498 aa11.79□□□□□ -0.52
C11orf54-214ENST00000540113 ARL5CA6NH57 179 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 BIRC5O15392 142 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 HNRNPCL1O60812 293 aaKnown RBP11.78□□□□□ -0.52
C11orf54-214ENST00000540113 SRGAP2BP0DMP2 458 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 CYBAP13498 195 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 NFKB1P19838 968 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 GJA9P57773 515 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 CRHR2Q13324 411 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 ITGA9Q13797 1035 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 ARHGAP36Q6ZRI8 547 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 PSTKQ8IV42 348 aaKnown RBP11.78□□□□□ -0.52
C11orf54-214ENST00000540113 DCLRE1BQ9H816 532 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 SNX15Q9NRS6 342 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 HHLA1C9JL84 531 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 GLRA3O75311 464 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 TBX10O75333 385 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 CAPN15O75808 1086 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 TOMM70O94826 608 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 SORBS2O94875 1100 aaKnown RBP11.78□□□□□ -0.52
C11orf54-214ENST00000540113 PSMG1O95456 288 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 PROCP04070 461 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 THP07101 528 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 FAM163BP0C2L3 166 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 CCNG1P51959 295 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 MGAT3Q09327 533 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 SREBF2Q12772 1141 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 TUBB3Q13509 450 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 KYAT3Q6YP21 454 aaKnown RBP11.78□□□□□ -0.52
C11orf54-214ENST00000540113 OTOP3Q7RTS5 596 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 BHLHA9Q7RTU4 235 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 EFCAB3Q8N7B9 438 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 HHIPL1Q96JK4 782 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 PPP1R36Q96LQ0 422 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 TMEM209Q96SK2 561 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 SORT1Q99523 831 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 RTP3Q9BQQ7 232 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 TUBB6Q9BUF5 446 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 ARHGAP39Q9C0H5 1083 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 TKTL2Q9H0I9 626 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 SIK2Q9H0K1 926 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 ZFYVE28Q9HCC9 887 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 SLC38A7Q9NVC3 462 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 FBXW11Q9UKB1 542 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 VANGL2Q9ULK5 521 aa11.78□□□□□ -0.52
C11orf54-214ENST00000540113 COL4A4P53420 1690 aaPredicted RBP11.77□□□□□ -0.52
C11orf54-214ENST00000540113 M0QZ92 97 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 MGEA5O60502 916 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 JCHAINP01591 159 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 LTFP02788 710 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 SLC25A3Q00325 362 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 TRIM32Q13049 653 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 USP4Q13107 963 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 SEMA3BQ13214 749 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 RAB41Q5JT25 222 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 FSTL4Q6MZW2 842 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 SERINC5Q86VE9 423 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 PIWIL2Q8TC59 973 aaKnown RBP11.77□□□□□ -0.52
C11orf54-214ENST00000540113 TRIB2Q92519 343 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 MIEF2Q96C03 454 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms