RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 FOXN3O00409 490 aaPredicted RBP20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 RNASEH2AO75792 299 aaKnown RBP20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 IGHV4-34P06331 123 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 GOT1P17174 413 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 ERCC5P28715 1186 aaPredicted RBP20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 CCR5P51681 352 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 SLC6A3Q01959 620 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 APBA1Q02410 837 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 FBXL22Q6P050 247 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 OLFML1Q6UWY5 402 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 FAM183BPQ6ZVS7 135 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 SND1Q7KZF4 910 aaKnown RBP eCLIP20.58■□□□□ 0.893e-6■□□□□ 8.1
UBE2D3-220ENST00000505307 PASD1Q8IV76 773 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 FAM71AQ8IYT1 594 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 BAHD1Q8TBE0 780 aaPredicted RBP20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 RHBDD1Q8TEB9 315 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 ZCCHC14Q8WYQ9 949 aaKnown RBP20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 PTPRN2Q92932 1015 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 RPRD1AQ96P16 312 aaPredicted RBP20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 ORAI3Q9BRQ5 295 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 ACE2Q9BYF1 805 aaPredicted RBP20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 NDST4Q9H3R1 872 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 SLCO1B1Q9Y6L6 691 aa20.58■□□□□ 0.89
UBE2D3-220ENST00000505307 SYNJ2BP-COX16A0A087WUM0 186 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 FAM47DPA6NHR8 397 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 VILLO15195 856 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 PCDHGA12O60330 932 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 DAB1O75553 588 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 PDGFRAP16234 1089 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 CLCN1P35523 988 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 CTSKP43235 329 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 CCT8P50990 548 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 C21orf59P57076 290 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 AUHQ13825 339 aaKnown RBP20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 VWA3BQ502W6 1294 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 ACBD5Q5T8D3 534 aaPredicted RBP20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 NCEH1Q6PIU2 408 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 DSG4Q86SJ6 1040 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 STK40Q8N2I9 435 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 RPL10LQ96L21 214 aaKnown RBP20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 SPAG5Q96R06 1193 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 CLSTN2Q9H4D0 955 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 COX16Q9P0S2 106 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 SERGEFQ9UGK8 458 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 RALYQ9UKM9 306 aaKnown RBP20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 PAXBP1Q9Y5B6 917 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 CABIN1Q9Y6J0 2220 aa20.57■□□□□ 0.88
UBE2D3-220ENST00000505307 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 CLDN11O75508 207 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 GRAP2O75791 330 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 ERBB2P04626 1255 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 GRK6P43250 576 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 PSMD8P48556 350 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 NME3Q13232 169 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 ZNF177Q13360 481 aaPredicted RBP20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 INAVAQ3KP66 663 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 CT47A1Q5JQC4 288 aaPredicted RBP20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 CXorf57Q6NSI4 855 aaKnown RBP20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 SLC47A2Q86VL8 602 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 TMEM35BQ8NCS4 154 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 TUBGCP2Q9BSJ2 902 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 KDM4CQ9H3R0 1056 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 SLC25A13Q9UJS0 675 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 STAP1Q9ULZ2 295 aa20.56■□□□□ 0.88
UBE2D3-220ENST00000505307 C10orf142B7Z368 130 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 M0QYT0 321 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 F9P00740 461 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 IL1BP01584 269 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 MZF1P28698 734 aaPredicted RBP20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 SCNN1AP37088 669 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 STK19P49842 368 aaPredicted RBP20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 C5orf22Q49AR2 442 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 PTPN20Q4JDL3 420 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 BRMS1LQ5PSV4 323 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 FAM46CQ5VWP2 391 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 SLCO6A1Q86UG4 719 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 FEM1AQ9BSK4 669 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 PDCL3Q9H2J4 239 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 VANGL2Q9ULK5 521 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 HS3ST4Q9Y661 456 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 CHD6Q8TD26 2715 aa20.55■□□□□ 0.88
UBE2D3-220ENST00000505307 ALOX15BO15296 676 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 SLC7A4O43246 635 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 ATP9BO43861 1147 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 PAGE1O75459 146 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 CDH5P33151 784 aaPredicted RBP20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 NUDT1P36639 197 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 CDH4P55283 916 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 SLC45A4Q5BKX6 768 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 CCNI2Q6ZMN8 369 aaPredicted RBP20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 CIR1Q86X95 450 aaPredicted RBP20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 AADATQ8N5Z0 425 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 PNPLA1Q8N8W4 532 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 OR14C36Q8NHC7 312 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 FRS2Q8WU20 508 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 OR8D1Q8WZ84 308 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 ALG14Q96F25 216 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 PGAP3Q96FM1 320 aaPredicted RBP20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 NPY6RQ99463 290 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 WDCPQ9H6R7 721 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms