RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TBC1D3LB9A6J9 549 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 VILLO15195 856 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 ERBB2P04626 1255 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 WNT1P04628 370 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 TBC1D3HP0C7X1 549 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 PNMA6AP0CW24 399 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-210ENST00000469897 SLC2A3P11169 496 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 C5AR1P21730 350 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 CLCN1P35523 988 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 IRAK1P51617 712 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 PLK1P53350 603 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 METAP1P53582 386 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 UBE2HP62256 183 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 AUHQ13825 339 aaKnown RBP13.69□□□□□ -0.22
CPSF4-210ENST00000469897 KCNJ12Q14500 433 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 TPD52L1Q16890 204 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-210ENST00000469897 ACCSLQ4AC99 568 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 CCDC157Q569K6 752 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 RABGAP1LQ5R372 815 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 TBC1D3GQ6DHY5 549 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 TBC1D3CQ6IPX1 549 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 FAM183BPQ6ZVS7 135 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 SND1Q7KZF4 910 aaKnown RBP eCLIP13.69□□□□□ -0.22
CPSF4-210ENST00000469897 C14orf80Q86SX3 495 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 SLC47A2Q86VL8 602 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 MARCH9Q86YJ5 346 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 TBC1D3Q8IZP1 549 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-210ENST00000469897 C1orf131Q8NDD1 294 aaKnown RBP13.69□□□□□ -0.22
CPSF4-210ENST00000469897 OR52K2Q8NGK3 314 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 OR2T34Q8NGX1 318 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 OR14C36Q8NHC7 312 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 FRS2Q8WU20 508 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 RPRD1AQ96P16 312 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-210ENST00000469897 ACE2Q9BYF1 805 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-210ENST00000469897 SIX2Q9NPC8 291 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 ASNSD1Q9NWL6 643 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 ADAMTS1Q9UHI8 967 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 FZD4Q9ULV1 537 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 HS3ST4Q9Y661 456 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 GON4LQ3T8J9 2241 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 CEP295Q9C0D2 2601 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 MYH10P35580 1976 aa13.69□□□□□ -0.22
CPSF4-210ENST00000469897 PLXND1Q9Y4D7 1925 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-210ENST00000469897 FAM170AA1A519 330 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 M0QYT0 321 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 PLK4O00444 970 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 HSF2BPO75031 334 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 ADH1BP00325 375 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 GGCXP38435 758 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 GRK6P43250 576 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 RNASE9P60153 205 aaKnown RBP13.68□□□□□ -0.22
CPSF4-210ENST00000469897 SLC6A3Q01959 620 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 CENPCQ03188 943 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 SULT2A1Q06520 285 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 ZNF177Q13360 481 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-210ENST00000469897 CXorf57Q6NSI4 855 aaKnown RBP13.68□□□□□ -0.22
CPSF4-210ENST00000469897 LRSAM1Q6UWE0 723 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 OLFML1Q6UWY5 402 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 GATAD2AQ86YP4 633 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 MLKLQ8NB16 471 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 ALG14Q96F25 216 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 NOX5Q96PH1 765 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 FEM1AQ9BSK4 669 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 SIK2Q9H0K1 926 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 SYNCQ9H7C4 482 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 AASDHPPTQ9NRN7 309 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 SARDHQ9UL12 918 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 VANGL2Q9ULK5 521 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 ASPMQ8IZT6 3477 aa13.68□□□□□ -0.22
CPSF4-210ENST00000469897 A0A1B0GTQ1 180 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 A0A1B0GVM2 712 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 GTPBP10A4D1E9 387 aaKnown RBP13.67□□□□□ -0.22
CPSF4-210ENST00000469897 TCAF2A6NFQ2 919 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 TNFSF14O43557 240 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 PCDHGA12O60330 932 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 DFNA5O60443 496 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 PAGE1O75459 146 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 TFE3P19532 575 aaPredicted RBP13.67□□□□□ -0.22
CPSF4-210ENST00000469897 CD38P28907 300 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 NOS2P35228 1153 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 CCT8P50990 548 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 CCR5P51681 352 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 OXCT1P55809 520 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 ELAVL3Q14576 367 aaKnown RBP13.67□□□□□ -0.22
CPSF4-210ENST00000469897 DLG2Q15700 870 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 PTPN20Q4JDL3 420 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 VWA3BQ502W6 1294 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 HSP90AA4PQ58FG1 418 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 TTC39BQ5VTQ0 682 aaPredicted RBP13.67□□□□□ -0.22
CPSF4-210ENST00000469897 TMPRSS7Q7RTY8 843 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 PROSER1Q86XN7 944 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 SKA1Q96BD8 255 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 SERAC1Q96JX3 654 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 PPP1R9BQ96SB3 815 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 ELF4Q99607 663 aaPredicted RBP13.67□□□□□ -0.22
CPSF4-210ENST00000469897 PDCL3Q9H2J4 239 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 NDST4Q9H3R1 872 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 WDCPQ9H6R7 721 aa13.67□□□□□ -0.22
CPSF4-210ENST00000469897 ANLNQ9NQW6 1124 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms