RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 RHBDD1Q8TEB9 315 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 PPP1R9BQ96SB3 815 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 FAM129BQ96TA1 746 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 PDCL3Q9H2J4 239 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 NDST4Q9H3R1 872 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 CLSTN2Q9H4D0 955 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 ADAMTS1Q9UHI8 967 aa21.69■■□□□ 1.06
VSX1-206ENST00000444511 NUMA1Q14980 2115 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 ZFHX4Q86UP3 3567 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 FAM221BA6H8Z2 402 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 DAB1O75553 588 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 IL1BP01584 269 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 MZF1P28698 734 aaPredicted RBP21.68■■□□□ 1.06
VSX1-206ENST00000444511 CLCN1P35523 988 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 C21orf59P57076 290 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 BPIFB4P59827 614 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 RACK1P63244 317 aaKnown RBP21.68■■□□□ 1.06
VSX1-206ENST00000444511 SLC6A3Q01959 620 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 AUHQ13825 339 aaKnown RBP21.68■■□□□ 1.06
VSX1-206ENST00000444511 ELAVL3Q14576 367 aaKnown RBP21.68■■□□□ 1.06
VSX1-206ENST00000444511 PTPN20Q4JDL3 420 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 VWA3BQ502W6 1294 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 SLC26A9Q7LBE3 791 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 OR2T34Q8NGX1 318 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 PTPRN2Q92932 1015 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 IGSF8Q969P0 613 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 CDC6Q99741 560 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 ORAI3Q9BRQ5 295 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 ACE2Q9BYF1 805 aaPredicted RBP21.68■■□□□ 1.06
VSX1-206ENST00000444511 PLCB1Q9NQ66 1216 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 VANGL2Q9ULK5 521 aa21.68■■□□□ 1.06
VSX1-206ENST00000444511 A0A1W2PPC4 97 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 M0QYT0 321 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 KCNK3O14649 394 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 GOT1P17174 413 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 C5AR1P21730 350 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 NOS2P35228 1153 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 PLK1P53350 603 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 CENPCQ03188 943 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 DPCR1Q3MIW9 517 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 HSP90AA4PQ58FG1 418 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 CXorf57Q6NSI4 855 aaKnown RBP21.67■■□□□ 1.06
VSX1-206ENST00000444511 DBX2Q6ZNG2 339 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 SND1Q7KZF4 910 aaKnown RBP eCLIP21.67■■□□□ 1.06
VSX1-206ENST00000444511 ZDHHC17Q8IUH5 632 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 FAM71AQ8IYT1 594 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 AADATQ8N5Z0 425 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 SKA1Q96BD8 255 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 SLC6A18Q96N87 628 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 TUBGCP2Q9BSJ2 902 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 DACH1Q9UI36 760 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 HS3ST4Q9Y661 456 aa21.67■■□□□ 1.06
VSX1-206ENST00000444511 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.66■■□□□ 1.06
VSX1-206ENST00000444511 PES1O00541 588 aaKnown RBP21.66■■□□□ 1.06
VSX1-206ENST00000444511 CTSKP43235 329 aa21.66■■□□□ 1.06
VSX1-206ENST00000444511 CCT8P50990 548 aa21.66■■□□□ 1.06
VSX1-206ENST00000444511 ZNF177Q13360 481 aaPredicted RBP21.66■■□□□ 1.06
VSX1-206ENST00000444511 RAPGEF1Q13905 1077 aa21.66■■□□□ 1.06
VSX1-206ENST00000444511 SLCO6A1Q86UG4 719 aa21.66■■□□□ 1.06
VSX1-206ENST00000444511 TMEM35BQ8NCS4 154 aa21.66■■□□□ 1.06
VSX1-206ENST00000444511 ZNF397Q8NF99 534 aaPredicted RBP21.66■■□□□ 1.06
VSX1-206ENST00000444511 OR14C36Q8NHC7 312 aa21.66■■□□□ 1.06
VSX1-206ENST00000444511 BAHD1Q8TBE0 780 aaPredicted RBP21.66■■□□□ 1.06
VSX1-206ENST00000444511 SPAG5Q96R06 1193 aa21.66■■□□□ 1.06
VSX1-206ENST00000444511 RRN3Q9NYV6 651 aa21.66■■□□□ 1.06
VSX1-206ENST00000444511 SLC25A13Q9UJS0 675 aa21.66■■□□□ 1.06
VSX1-206ENST00000444511 BTBD3Q9Y2F9 522 aa21.66■■□□□ 1.06
VSX1-206ENST00000444511 H0Y8X5 98 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 VILLO15195 856 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 PAGE1O75459 146 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 VAV1P15498 845 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 ERCC5P28715 1186 aaPredicted RBP21.65■■□□□ 1.06
VSX1-206ENST00000444511 GGCXP38435 758 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 RNASE9P60153 205 aaKnown RBP21.65■■□□□ 1.06
VSX1-206ENST00000444511 DRAP1Q14919 205 aaPredicted RBP21.65■■□□□ 1.06
VSX1-206ENST00000444511 ACCSLQ4AC99 568 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 KCNT1Q5JUK3 1230 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 MIIPQ5JXC2 388 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 DSG4Q86SJ6 1040 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 FRS2Q8WU20 508 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 FEM1AQ9BSK4 669 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 SIK2Q9H0K1 926 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 AASDHPPTQ9NRN7 309 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 VPS28Q9UK41 221 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 STAP1Q9ULZ2 295 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 IGF2RP11717 2491 aa21.65■■□□□ 1.06
VSX1-206ENST00000444511 ASPMQ8IZT6 3477 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 SRRM3A6NNA2 597 aaPredicted RBP21.64■■□□□ 1.05
VSX1-206ENST00000444511 PCDHGA12O60330 932 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 DFNA5O60443 496 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 CLDN11O75508 207 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 GRK6P43250 576 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 IRAK1P51617 712 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 CCR5P51681 352 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 ADPRHP54922 357 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 OR8D1Q8WZ84 308 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 NUP62CLQ9H1M0 184 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 WDCPQ9H6R7 721 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 EBF2Q9HAK2 575 aa21.64■■□□□ 1.05
VSX1-206ENST00000444511 PIGVQ9NUD9 493 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms