RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 FAM57BQ71RH2 274 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 CCDC28AQ8IWP9 274 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 UEVLDQ8IX04 471 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 MPLKIPQ8TAP9 179 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 AKAP1Q92667 903 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 COG3Q96JB2 828 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 PKNOX2Q96KN3 472 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 TBCBQ99426 244 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 SENP7Q9BQF6 1050 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 RNF26Q9BY78 433 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 METTL14Q9HCE5 456 aaKnown RBP5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 ASNSD1Q9NWL6 643 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 FAM50BQ9Y247 325 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 KCPQ6ZWJ8 1503 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 PXDNLA1KZ92 1463 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 ITGB4P16144 1822 aa5.58□□□□□ -1.52
HMGB3P5-201ENST00000428894 EDC4Q6P2E9 1401 aaKnown RBP5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 SMG6Q86US8 1419 aaKnown RBP5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 GLTPD2A6NH11 291 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 PRYO14603 147 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 APOL1O14791 398 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 OAZ2O95190 189 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 IDEP14735 1019 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 ST6GAL1P15907 406 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 MATN1P21941 496 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 MMP8P22894 467 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 MST1P26927 711 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 SLC5A2P31639 672 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 RFC4P35249 363 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 HOXD12P35452 270 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 PRIM2P49643 509 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 SLC12A2P55011 1212 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 KRTAP10-9P60411 292 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 B4GALNT1Q00973 533 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 RAP1GAP2Q684P5 730 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 MMP21Q8N119 569 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 CELF1Q92879 486 aaKnown RBP5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 SNX27Q96L92 541 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 PCDHAC1Q9H158 963 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 BRCA1P38398 1863 aaKnown RBP5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 PKD1L3Q7Z443 1732 aa5.57□□□□□ -1.52
HMGB3P5-201ENST00000428894 SLC5A1P13866 664 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 GSTM5P46439 218 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 CTCFP49711 727 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 ELF2Q15723 593 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 COBLL1Q53SF7 1204 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 TLDC1Q6P9B6 456 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 KYAT3Q6YP21 454 aaKnown RBP5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 OVCA2Q8WZ82 227 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 PIGBQ92521 554 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 GRAMD1AQ96CP6 724 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 GATA5Q9BWX5 397 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 KRTAP1-5Q9BYS1 174 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 MOV10Q9HCE1 1003 aaKnown RBP5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 SEMA4BQ9NPR2 832 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 RXFP3Q9NSD7 469 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 TMOD3Q9NYL9 352 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 RGPD2P0DJD1 1756 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 CD163L1Q9NR16 1453 aa5.56□□□□□ -1.52
HMGB3P5-201ENST00000428894 MAP3K19Q56UN5 1328 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 MEGF6O75095 1541 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 CCDC187A0A096LP49 1063 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 A0A1W2PPC4 97 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 B4DGG1 531 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 NDST3O95803 873 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 NDUFS1P28331 727 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 GABRB3P28472 473 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 IFIT5Q13325 482 aaKnown RBP5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 ATP1A4Q13733 1029 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 ARHGAP15Q53QZ3 475 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 CCDC144NLQ6NUI1 221 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 SMIM5Q71RC9 77 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 SKAP1Q86WV1 359 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 ADGRF4Q8IZF3 695 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 CLASRPQ8N2M8 674 aaKnown RBP5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 OR52L2PQ8NGH6 319 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 EIF3CQ99613 913 aaKnown RBP5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 COLEC11Q9BWP8 271 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 FAM234AQ9H0X4 552 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 TMEM8AQ9HCN3 771 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 ZBTB40Q9NUA8 1239 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 MAN2B2Q9Y2E5 1009 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 CCDC88AQ3V6T2 1871 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 RTL1A6NKG5 1358 aa5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 ROCK2O75116 1388 aaKnown RBP5.55□□□□□ -1.52
HMGB3P5-201ENST00000428894 KIAA1551Q9HCM1 1747 aa5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 TOGARAM1Q9Y4F4 1720 aa5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 MAP2P11137 1827 aaKnown RBP5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 IGLV5-39A0A0G2JS06 123 aa5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 F8W810 466 aa5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 UGDHO60701 494 aa5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 ALPLP05186 524 aa5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 ALADP13716 330 aa5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 GYS1P13807 737 aa5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 PECAM1P16284 738 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 TFEBP19484 476 aa5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 CCKARP32238 428 aa5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 IL6STP40189 918 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P5-201ENST00000428894 SOX2P48431 317 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms