RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 LINC00114Q6XXX2 140 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 GPBP1Q86WP2 473 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 CDR2LQ86X02 465 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 CXorf67Q86X51 503 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 CEP97Q8IW35 865 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 CCDC103Q8IW40 242 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 FAM114A1Q8IWE2 563 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 DAW1Q8N136 415 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 OR8H3Q8N146 312 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 NUP93Q8N1F7 819 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 GBP7Q8N8V2 638 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 TRIML1Q8N9V2 468 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 ATP11CQ8NB49 1132 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 RNF149Q8NC42 400 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 RNF169Q8NCN4 708 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 CEP70Q8NHQ1 597 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 FAM76AQ8TAV0 307 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 CREB3L4Q8TEY5 395 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 PSPC1Q8WXF1 523 aaKnown RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 AUTS2Q8WXX7 1259 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 RABGGTAQ92696 567 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 APBB2Q92870 758 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 ANKRD27Q96NW4 1050 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 NACC1Q96RE7 527 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 ADAM2Q99965 735 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 NRSN2Q9GZP1 204 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 BRD8Q9H0E9 1235 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 MTIF3Q9H2K0 278 aaKnown RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 TTYH1Q9H313 450 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 VIPAS39Q9H9C1 493 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 TMEM160Q9NX00 188 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 MYO1AQ9UBC5 1043 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 DNAI1Q9UI46 699 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 RASAL2Q9UJF2 1139 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 DBR1Q9UK59 544 aaKnown RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 RAB21Q9UL25 225 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 MTUS1Q9ULD2 1270 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 PIN4Q9Y237 131 aaKnown RBP4.75□□□□□ -1.65
SF3B1-202ENST00000409915 SNX8Q9Y5X2 465 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 ST14Q9Y5Y6 855 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 FAM169AQ9Y6X4 670 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 MICAL3Q7RTP6 2002 aa4.75□□□□□ -1.65
SF3B1-202ENST00000409915 ADGRA3Q8IWK6 1321 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 LOXHD1Q8IVV2 1947 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 COL4A6Q14031 1691 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 DENND3A2RUS2 1198 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 KRBA1A5PL33 1030 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 EPOPA6NHQ4 379 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ENO4A6NNW6 628 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 PI4K2BG5E9Z4 385 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ZNF561-AS1K7EIQ3 104 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 PIK3R2O00459 728 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 EBAG9O00559 213 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 KCNK3O14649 394 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 HNRNPDLO14979 420 aaKnown RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 FANCGO15287 622 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 B4GALT5O43286 388 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 TSPAN1O60635 241 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 KRT38O76015 456 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 TMEM63AO94886 807 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 CSPG5O95196 566 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 GJB5O95377 273 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 YEATS4O95619 227 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 AMHP03971 560 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 EDN1P05305 212 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 LPLP06858 475 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 HNRNPA1P09651 372 aaKnown RBP eCLIP4.74□□□□□ -1.651e-13■■■■□ 20.2
SF3B1-202ENST00000409915 TMEM253P0C7T8 217 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 PLA2G4BP0C869 781 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 KITP10721 976 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 EZRP15311 586 aaKnown RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 KRT15P19012 456 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 CYP11B2P19099 503 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 SFPQP23246 707 aaKnown RBP eCLIP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ARL2P36404 184 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 STAT5AP42229 794 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ARHGAP25P42331 645 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ME1P48163 572 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 CCR5P51681 352 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 CCR9P51686 369 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 CLCN2P51788 898 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ZNF75DP51815 510 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 SLC12A2P55011 1212 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 SLC12A3P55017 1021 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 INHBCP55103 352 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 MANFP55145 182 aaKnown RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 JAM2P57087 298 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 MBTD1Q05BQ5 628 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 IFFO1Q0D2I5 559 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 LRMPQ12912 555 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 DUSP4Q13115 394 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 KCNAB2Q13303 367 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 PRPF4BQ13523 1007 aaKnown RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 SLC12A1Q13621 1099 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 EFR3AQ14156 821 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 BTG3Q14201 252 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 KCNB1Q14721 858 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 MYBPC3Q14896 1274 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms