RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 AIF1P55008 147 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 ACTN3Q08043 901 aaPredicted RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 SPANXN3Q5MJ09 141 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 HECTD3Q5T447 861 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 MRNIPQ6NTE8 343 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 ZNF75CPQ92670 426 aaPredicted RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 CENPTQ96BT3 561 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 UBE2OQ9C0C9 1292 aaKnown RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 KLC4Q9NSK0 619 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 ACOT9Q9Y305 439 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 ACTL7BQ9Y614 415 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 UBOX5O94941 541 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 DPYSL2Q16555 572 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 CCDC142Q17RM4 750 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 FAM83EQ2M2I3 478 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 B3GALT6Q96L58 329 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 FAM161BQ96MY7 647 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 EGFL8Q99944 293 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 ZYG11BQ9C0D3 744 aa14.34□□□□□ -0.11
SCAF4-202ENST00000399804 FARP1Q9Y4F1 1045 aaPredicted RBP14.34□□□□□ -0.11
SCAF4-202ENST00000399804 SH3BP5O60239 455 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 PSEN1P49768 467 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 MAXP61244 160 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 HABP4Q5JVS0 413 aaKnown RBP14.33□□□□□ -0.12
SCAF4-202ENST00000399804 C16orf46Q6P387 395 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 AGMOQ6ZNB7 445 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 TBL1YQ9BQ87 522 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 PCDHB8Q9UN66 801 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 CPA3P15088 417 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 KCNA4P22459 653 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 LPIN1Q14693 890 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 ZNF470Q6ECI4 717 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 MFSD5Q6N075 450 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 FUT10Q6P4F1 479 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 C16orf59Q7L2K0 433 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 PIGVQ9NUD9 493 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 A0A096LPK6 155 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 LOC100653049A0A140TA62 436 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 C2orf81A6NN90 581 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 KRT34O76011 436 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 TMEM63AO94886 807 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 CREB1P16220 341 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 CHRM3P20309 590 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 TARSP26639 723 aaKnown RBP14.33□□□□□ -0.12
SCAF4-202ENST00000399804 CPA2P48052 419 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 CLNS1AP54105 237 aaKnown RBP14.33□□□□□ -0.12
SCAF4-202ENST00000399804 RHOAP61586 193 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 UNC5AQ6ZN44 842 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 PEBP4Q96S96 227 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 IL22Q9GZX6 179 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 DNMT3LQ9UJW3 386 aa14.33□□□□□ -0.12
SCAF4-202ENST00000399804 ARVCFO00192 962 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 NRP1O14786 923 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 SOAT2O75908 522 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 RALBP11234 206 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 TYMPP19971 482 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 KLRC2P26717 231 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 LRPAP1P30533 357 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 OASLQ15646 514 aaKnown RBP14.32□□□□□ -0.12
SCAF4-202ENST00000399804 SCARA3Q6AZY7 606 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 ITIH5Q86UX2 942 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 LRRC43Q8N309 656 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 TMA16Q96EY4 203 aaKnown RBP14.32□□□□□ -0.12
SCAF4-202ENST00000399804 CERS2Q96G23 380 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 TMPRSS4Q9NRS4 437 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 AFF4Q9UHB7 1163 aaKnown RBP14.32□□□□□ -0.12
SCAF4-202ENST00000399804 FZD10Q9ULW2 581 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 RHOBTB1O94844 696 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 CKBP12277 381 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 TEX44Q53QW1 395 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 IRGQQ8WZA9 623 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 SCUBE2Q9NQ36 999 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 CRTAC1Q9NQ79 661 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 CREBZFQ9NS37 354 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 TMEM161AQ9NX61 479 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 PKP3Q9Y446 797 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 CHRNA1P02708 482 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 TSHRP16473 764 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 GABRB2P47870 512 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 SCTRP47872 440 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 ITGA9Q13797 1035 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 ZCCHC23Q6ZST2 131 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 DENND1CQ8IV53 801 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 PARP9Q8IXQ6 854 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 CCDC124Q96CT7 223 aaKnown RBP14.32□□□□□ -0.12
SCAF4-202ENST00000399804 QKIQ96PU8 341 aaKnown RBP eCLIP14.32□□□□□ -0.126e-7■■■■□ 23
SCAF4-202ENST00000399804 SLC9A7Q96T83 725 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 HERPUD2Q9BSE4 406 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 FBXW11Q9UKB1 542 aa14.32□□□□□ -0.12
SCAF4-202ENST00000399804 ZBTB24O43167 697 aaPredicted RBP14.31□□□□□ -0.12
SCAF4-202ENST00000399804 GRTP1Q5TC63 336 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 C1orf146Q5VVC0 180 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 MTDHQ86UE4 582 aaKnown RBP14.31□□□□□ -0.12
SCAF4-202ENST00000399804 DDIASQ8IXT1 998 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 KLHL5Q96PQ7 755 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 CPNE1Q99829 537 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 SMOQ99835 787 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 PAAF1Q9BRP4 392 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 TMEM109Q9BVC6 243 aa14.31□□□□□ -0.12
SCAF4-202ENST00000399804 SLCO1B3Q9NPD5 702 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms