RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 DIAPH2O60879 1101 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 KIAA0754O94854 1291 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 REC8O95072 547 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 EIF2S1P05198 315 aaKnown RBP5.21□□□□□ -1.58
GABPB1-204ENST00000396464 GRPP07492 148 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 INHBAP08476 426 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 KCNA5P22460 613 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 TNFRSF8P28908 595 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 ACAA2P42765 397 aaKnown RBP5.21□□□□□ -1.58
GABPB1-204ENST00000396464 IFNAR2P48551 515 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 MRPL12P52815 198 aaKnown RBP5.21□□□□□ -1.58
GABPB1-204ENST00000396464 CTXN1P60606 82 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 MEF2AQ02078 507 aaPredicted RBP5.21□□□□□ -1.58
GABPB1-204ENST00000396464 CYP4A11Q02928 519 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 ATP1A4Q13733 1029 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 CAPSQ13938 189 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 CDSNQ15517 529 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 MEP1BQ16820 701 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 C10orf76Q5T2E6 689 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 TMEM154Q6P9G4 183 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 LRSAM1Q6UWE0 723 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 UBE3BQ7Z3V4 1068 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 SYT2Q8N9I0 419 aaPredicted RBP5.21□□□□□ -1.58
GABPB1-204ENST00000396464 GMCL1P1Q8NEA9 526 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 CALML6Q8TD86 181 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 WDR60Q8WVS4 1066 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 LRRC59Q96AG4 307 aaKnown RBP5.21□□□□□ -1.58
GABPB1-204ENST00000396464 TUBB6Q9BUF5 446 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 ZNF747Q9BV97 191 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 HERC2P3Q9BVR0 1158 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 AMNQ9BXJ7 453 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 ZNF341Q9BYN7 854 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 KRTAP17-1Q9BYP8 105 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 CPEB1Q9BZB8 566 aaKnown RBP5.21□□□□□ -1.58
GABPB1-204ENST00000396464 MROH8Q9H579 483 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 LANCL2Q9NS86 450 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 AATFQ9NY61 560 aaKnown RBP eCLIP5.21□□□□□ -1.583e-7■■■□□ 15.6
GABPB1-204ENST00000396464 EHD2Q9NZN4 543 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 KCND2Q9NZV8 630 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 PTRH2Q9Y3E5 179 aaKnown RBP5.21□□□□□ -1.58
GABPB1-204ENST00000396464 PNMA6EA0A0J9YXQ4 647 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 FAM237BA0A1B0GVD1 139 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 A0A1W2PR48 441 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 H0YC42 278 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 MYO1CO00159 1063 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 IKBKBO14920 756 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 SYN3O14994 580 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 GRM6O15303 877 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 DHHO43323 396 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 TLR2O60603 784 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 ZNF623O75123 536 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 PEX11AO75192 247 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 TAF5LO75529 589 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 GNAI3P08754 354 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 PDHBP11177 359 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 CCNA2P20248 432 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 FPR1P21462 350 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 KELP23276 732 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 PRKCHP24723 683 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 AVPR2P30518 371 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 CCR10P46092 362 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 CD151P48509 253 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 CAMLGP49069 296 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 WNT3P56703 355 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 YPEL5P62699 121 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 GNAI1P63096 354 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 SCN1BQ07699 218 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 DBPQ10586 325 aaPredicted RBP5.2□□□□□ -1.58
GABPB1-204ENST00000396464 TBL3Q12788 808 aaKnown RBP5.2□□□□□ -1.58
GABPB1-204ENST00000396464 SF3A3Q12874 501 aaKnown RBP eCLIP5.2□□□□□ -1.58
GABPB1-204ENST00000396464 TMEM115Q12893 351 aaPredicted RBP5.2□□□□□ -1.58
GABPB1-204ENST00000396464 GPS1Q13098 491 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 BMPR2Q13873 1038 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 ZNF568Q3ZCX4 644 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 LRRC24Q50LG9 513 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 ISLR2Q6UXK2 745 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 RUFY3Q7L099 469 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 DSG4Q86SJ6 1040 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 RTL3Q8N8U3 475 aaKnown RBP5.2□□□□□ -1.58
GABPB1-204ENST00000396464 MRPL43Q8N983 215 aaKnown RBP5.2□□□□□ -1.58
GABPB1-204ENST00000396464 IL17RCQ8NAC3 791 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 DNERQ8NFT8 737 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 FAM216AQ8WUB2 273 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 ANKRD49Q8WVL7 239 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 CLMNQ96JQ2 1002 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 FIZ1Q96SL8 496 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 PKP4Q99569 1192 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 TXN2Q99757 166 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 TCHPQ9BT92 498 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 TTPALQ9BTX7 342 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 MECRQ9BV79 373 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 HAPLN2Q9GZV7 340 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 ABCG8Q9H221 673 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 HSD3B7Q9H2F3 369 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 SLC32A1Q9H598 525 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 RPAP3Q9H6T3 665 aaPredicted RBP5.2□□□□□ -1.58
GABPB1-204ENST00000396464 SCPEP1Q9HB40 452 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 IL1RAPL2Q9NP60 686 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 KCMF1Q9P0J7 381 aa5.2□□□□□ -1.58
GABPB1-204ENST00000396464 DKK4Q9UBT3 224 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms