RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 HARS2P49590 506 aaKnown RBP15.75■□□□□ 0.11
CPSF7-202ENST00000394888 SCNN1GP51170 649 aa15.75■□□□□ 0.11
CPSF7-202ENST00000394888 KPNB1Q14974 876 aaKnown RBP15.75■□□□□ 0.11
CPSF7-202ENST00000394888 DBN1Q16643 649 aa15.75■□□□□ 0.11
CPSF7-202ENST00000394888 TWF2Q6IBS0 349 aaKnown RBP15.75■□□□□ 0.11
CPSF7-202ENST00000394888 CCSAPQ6IQ19 270 aaPredicted RBP15.75■□□□□ 0.11
CPSF7-202ENST00000394888 RNF111Q6ZNA4 994 aa15.75■□□□□ 0.11
CPSF7-202ENST00000394888 TACO1Q9BSH4 297 aaKnown RBP15.75■□□□□ 0.11
CPSF7-202ENST00000394888 SNX15Q9NRS6 342 aa15.75■□□□□ 0.11
CPSF7-202ENST00000394888 ARHGEF38Q9NXL2 777 aa15.75■□□□□ 0.11
CPSF7-202ENST00000394888 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.75■□□□□ 0.11
CPSF7-202ENST00000394888 TARM1B6A8C7 271 aa15.75■□□□□ 0.11
CPSF7-202ENST00000394888 FSTL4Q6MZW2 842 aa15.75■□□□□ 0.11
CPSF7-202ENST00000394888 NUDCD3Q8IVD9 361 aa15.75■□□□□ 0.11
CPSF7-202ENST00000394888 DCLK2Q8N568 766 aa15.75■□□□□ 0.11
CPSF7-202ENST00000394888 MYLPFQ96A32 169 aa15.75■□□□□ 0.11
CPSF7-202ENST00000394888 FAM136AQ96C01 138 aa15.75■□□□□ 0.11
CPSF7-202ENST00000394888 PRR5-ARHGAP8B1AHC4 643 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 M0QZQ0 153 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 LTFP02788 710 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 RPSAP08865 295 aaKnown RBP15.74■□□□□ 0.11
CPSF7-202ENST00000394888 NUMBP49757 651 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 ARHGAP8P85298 464 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 TMPRSS15P98073 1019 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 MSLNQ13421 630 aaPredicted RBP15.74■□□□□ 0.11
CPSF7-202ENST00000394888 RPAINQ86UA6 219 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 KBTBD2Q8IY47 623 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 PGBD4Q96DM1 585 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 OSER1Q9NX31 292 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 COPG2Q9UBF2 871 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 ANKRD36A6QL64 1941 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 CCDC22O60826 627 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 USP1O94782 785 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 KITP10721 976 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 NAB1Q13506 487 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 CMPK2Q5EBM0 449 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 ZNF683Q8IZ20 524 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 SCAMP5Q8TAC9 235 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 CLPTM1LQ96KA5 538 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 CAB39LQ9H9S4 337 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 RAD54BQ9Y620 910 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 CASTOR2A6NHX0 329 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 KRT36O76013 467 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 SORBS2O94875 1100 aaKnown RBP15.74■□□□□ 0.11
CPSF7-202ENST00000394888 PEX11BO96011 259 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 AOC1P19801 751 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 MAP2K2P36507 400 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 ABCG1P45844 678 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 CPA2P48052 419 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 PTDSS1P48651 473 aaKnown RBP15.74■□□□□ 0.11
CPSF7-202ENST00000394888 LIMK2P53671 638 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 TRIM32Q13049 653 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 BZW1Q7L1Q6 419 aaKnown RBP15.74■□□□□ 0.11
CPSF7-202ENST00000394888 TMEM86AQ8N2M4 240 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 MAPK15Q8TD08 544 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 CHRAC1Q9NRG0 131 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 PNPOQ9NVS9 261 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 THAP1Q9NVV9 213 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 CDH9Q9ULB4 789 aa15.74■□□□□ 0.11
CPSF7-202ENST00000394888 HNRNPCL1O60812 293 aaKnown RBP15.73■□□□□ 0.11
CPSF7-202ENST00000394888 FBXO21O94952 628 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 NFKB1P19838 968 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 BTKQ06187 659 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 TRIM71Q2Q1W2 868 aaKnown RBP15.73■□□□□ 0.11
CPSF7-202ENST00000394888 ANKRD20A4Q4UJ75 823 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 SPANXN3Q5MJ09 141 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 PANX3Q96QZ0 392 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 MMADHCQ9H3L0 296 aaPredicted RBP15.73■□□□□ 0.11
CPSF7-202ENST00000394888 TRPV2Q9Y5S1 764 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 PTCH2Q9Y6C5 1203 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 PLXNA4Q9HCM2 1894 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 E2F8A0AVK6 867 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 XPOTO43592 962 aaKnown RBP15.73■□□□□ 0.11
CPSF7-202ENST00000394888 ADAMTS4O75173 837 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 NMBRP28336 390 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 ADRA1AP35348 466 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 IDH3AP50213 366 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 SCD5Q86SK9 330 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.73■□□□□ 0.118e-6■■■■■ 46.4
CPSF7-202ENST00000394888 N4BP2L2Q92802 583 aaPredicted RBP15.73■□□□□ 0.11
CPSF7-202ENST00000394888 TEKT5Q96M29 485 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 TSGA13Q96PP4 275 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 APBA2Q99767 749 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 ARHGAP39Q9C0H5 1083 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 NOL6Q9H6R4 1146 aaKnown RBP15.73■□□□□ 0.11
CPSF7-202ENST00000394888 SEPT10Q9P0V9 454 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 A0A088AWK7 358 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 FAM155AB1AL88 458 aaPredicted RBP15.73■□□□□ 0.11
CPSF7-202ENST00000394888 TBX10O75333 385 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 NCAM1P13591 858 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 IRX4P78413 519 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 VWA5B1Q5TIE3 1220 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 TRAF7Q6Q0C0 670 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 OTOP3Q7RTS5 596 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 TKTL2Q9H0I9 626 aa15.73■□□□□ 0.11
CPSF7-202ENST00000394888 PPP1R12AO14974 1030 aaPredicted RBP15.72■□□□□ 0.11
CPSF7-202ENST00000394888 SERPINA6P08185 405 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 EZRP15311 586 aaKnown RBP15.72■□□□□ 0.11
CPSF7-202ENST00000394888 BRCC3P46736 316 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 ARCN1P48444 511 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms