RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 PIK3R2O00459 728 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 TNPO2O14787 897 aaKnown RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 AURKAO14965 403 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 NCAM1P13591 858 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 TCN1P20061 433 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 RPL10AP62906 217 aaKnown RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 ZNF846Q147U1 533 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 SLC9B1Q4ZJI4 515 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 FSCBQ5H9T9 825 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 SLX4IPQ5VYV7 408 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 C16orf89Q6UX73 402 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 CYP4V2Q6ZWL3 525 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 PIWIL3Q7Z3Z3 882 aaKnown RBP9.76□□□□□ -0.85
SF3A3-201ENST00000373019 MYCT1Q8N699 235 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 PPM1NQ8N819 430 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 EYA3Q99504 573 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 POLE4Q9NR33 117 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 SEL1LQ9UBV2 794 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 USTQ9Y2C2 406 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 CNTNAP2Q9UHC6 1331 aa9.76□□□□□ -0.85
SF3A3-201ENST00000373019 hCG_1984214I3L0E3 225 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 SEC24DO94855 1032 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-201ENST00000373019 CLIC3O95833 236 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 UGT2B4P06133 528 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 NRLP54845 237 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 PHC1P78364 1004 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 NEDD8Q15843 81 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 TXNRD3NBQ6F5E7 133 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 CHSY3Q70JA7 882 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 KIAA2013Q8IYS2 634 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 BEND7Q8N7W2 519 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-201ENST00000373019 PDPRQ8NCN5 879 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 MAPK15Q8TD08 544 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 CDK5RAP1Q96SZ6 601 aaKnown RBP9.75□□□□□ -0.85
SF3A3-201ENST00000373019 EMILIN2Q9BXX0 1053 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 GLT8D2Q9H1C3 349 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 MRGBPQ9NV56 204 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 PSME2Q9UL46 239 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 SNX13Q9Y5W8 968 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 NUP98P52948 1817 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 CFLARO15519 480 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 KRT37O76014 449 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 CPNE6O95741 557 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 GLDCP23378 1020 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 LEPRP48357 1165 aaKnown RBP9.75□□□□□ -0.85
SF3A3-201ENST00000373019 KRT6CP48668 564 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 DOK7Q18PE1 504 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 AKAP14Q86UN6 197 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 SNX32Q86XE0 403 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 SLC9A9Q8IVB4 645 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.75□□□□□ -0.85
SF3A3-201ENST00000373019 OSCP1Q8WVF1 389 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 UHRF1Q96T88 793 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-201ENST00000373019 ZC3H12CQ9C0D7 883 aaKnown RBP9.75□□□□□ -0.85
SF3A3-201ENST00000373019 COG4Q9H9E3 785 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 PNPLA8Q9NP80 782 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 FRMPD2Q68DX3 1309 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-201ENST00000373019 C9IYK1 514 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 M0QX08 132 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 PRDX5P30044 214 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 VAMP7P51809 220 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 AQP6Q13520 282 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 GTF2IRD2BQ6EKJ0 949 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 EPGNQ6UW88 154 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 GLRX5Q86SX6 157 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 GTF2IRD2Q86UP8 949 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 RCOR2Q8IZ40 523 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 FAM110BQ8TC76 370 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 MBOAT7Q96N66 472 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 TUBA1CQ9BQE3 449 aa9.75□□□□□ -0.85
SF3A3-201ENST00000373019 hCG_1818297A0A087WSY0 165 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 FAM172BPA6NC97 362 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 ZBTB39O15060 712 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 ACOX3O15254 700 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 SEC14L2O76054 403 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 PRKCGP05129 697 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 DDX5P17844 614 aaKnown RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 PIK3R1P27986 724 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 PSMC5P62195 406 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 PRKCQQ04759 706 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 MAMLD1Q13495 774 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 PTK2BQ14289 1009 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 PCLAFQ15004 111 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 IQSEC1Q6DN90 963 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 SPOCD1Q6ZMY3 1216 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 GADL1Q6ZQY3 521 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 ZBTB49Q6ZSB9 765 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 MON1BQ7L1V2 547 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 HAUS6Q7Z4H7 955 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 SLC22A16Q86VW1 577 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 CCDC60Q8IWA6 550 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 CTAGE3PQ8IX95 158 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 ZNF444Q8N0Y2 327 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 PGAM4Q8N0Y7 254 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 TNIP2Q8NFZ5 429 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 ANGPTL6Q8NI99 470 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 ZFP90Q8TF47 636 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 SNX19Q92543 992 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 ACSF2Q96CM8 615 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 RCN3Q96D15 328 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms