RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 OTUD1Q5VV17 481 aaPredicted RBP18.28■□□□□ 0.52
HDDC3-201ENST00000330334 DBX2Q6ZNG2 339 aa18.28■□□□□ 0.52
HDDC3-201ENST00000330334 SND1Q7KZF4 910 aaKnown RBP eCLIP18.28■□□□□ 0.52
HDDC3-201ENST00000330334 XYLT1Q86Y38 959 aa18.28■□□□□ 0.52
HDDC3-201ENST00000330334 MSANTD4Q8NCY6 345 aa18.28■□□□□ 0.52
HDDC3-201ENST00000330334 PTPRN2Q92932 1015 aa18.28■□□□□ 0.52
HDDC3-201ENST00000330334 FEM1AQ9BSK4 669 aa18.28■□□□□ 0.52
HDDC3-201ENST00000330334 PIGVQ9NUD9 493 aa18.28■□□□□ 0.52
HDDC3-201ENST00000330334 COX16Q9P0S2 106 aa18.28■□□□□ 0.52
HDDC3-201ENST00000330334 TPX2Q9ULW0 747 aaKnown RBP18.28■□□□□ 0.52
HDDC3-201ENST00000330334 TRIM16O95361 564 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 CER1O95813 267 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 TPM2P07951 284 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 C5AR1P21730 350 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 SLC8A1P32418 973 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 RDXP35241 583 aaKnown RBP18.27■□□□□ 0.52
HDDC3-201ENST00000330334 GRIA4P48058 902 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 CDH4P55283 916 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 BNC1Q01954 994 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 KRT31Q15323 416 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 TEAD4Q15561 434 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 BNIPLQ7Z465 357 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 NOP9Q86U38 636 aaKnown RBP18.27■□□□□ 0.52
HDDC3-201ENST00000330334 GPT2Q8TD30 523 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 EPS8L1Q8TE68 723 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 FRS2Q8WU20 508 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 RPL10LQ96L21 214 aaKnown RBP18.27■□□□□ 0.52
HDDC3-201ENST00000330334 ORAI3Q9BRQ5 295 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 ADAM33Q9BZ11 813 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 GANQ9H2C0 597 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 TAB2Q9NYJ8 693 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 VANGL2Q9ULK5 521 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 PCDHGB2Q9Y5G2 931 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 OR51B4Q9Y5P0 310 aa18.27■□□□□ 0.52
HDDC3-201ENST00000330334 NUMA1Q14980 2115 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 FRYQ5TBA9 3013 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 KNL1Q8NG31 2342 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 ADAMTS9Q9P2N4 1935 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 LRRC10BA6NIK2 292 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 DRGXA6NNA5 263 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 MID1O15344 667 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 ATP9BO43861 1147 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 ADCY5O95622 1261 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 ADH1BP00325 375 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 GOT1P17174 413 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 GALCP54803 685 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 RNASE9P60153 205 aaKnown RBP18.26■□□□□ 0.51
HDDC3-201ENST00000330334 SIM1P81133 766 aaPredicted RBP18.26■□□□□ 0.51
HDDC3-201ENST00000330334 FOXC1Q12948 553 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 HLA-BQ31612 363 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 FAM102AQ5T9C2 384 aaPredicted RBP18.26■□□□□ 0.51
HDDC3-201ENST00000330334 KIAA0895LQ68EN5 471 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 C14orf80Q86SX3 495 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 CIR1Q86X95 450 aaPredicted RBP18.26■□□□□ 0.51
HDDC3-201ENST00000330334 MMAAQ8IVH4 418 aaKnown RBP18.26■□□□□ 0.51
HDDC3-201ENST00000330334 GANCQ8TET4 914 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 SPAG5Q96R06 1193 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 OMDQ99983 421 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 TKTL2Q9H0I9 626 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 VPS16Q9H269 839 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 NEUROG2Q9H2A3 272 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 GAREM1Q9H706 876 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 TM9SF3Q9HD45 589 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 TMEM59LQ9UK28 342 aa18.26■□□□□ 0.51
HDDC3-201ENST00000330334 LRRC72A6NJI9 287 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 SH3BP5O60239 455 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 FSBPO95073 299 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 IGHV4-34P06331 123 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 CSNK1EP49674 416 aaKnown RBP18.25■□□□□ 0.51
HDDC3-201ENST00000330334 STK19P49842 368 aaPredicted RBP18.25■□□□□ 0.51
HDDC3-201ENST00000330334 NOMO3P69849 1222 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 CDR2Q01850 454 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 CENPCQ03188 943 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 DEUP1Q05D60 604 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 ZNF423Q2M1K9 1284 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 FKBP15Q5T1M5 1219 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 TAF3Q5VWG9 929 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 LRSAM1Q6UWE0 723 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 SETD3Q86TU7 594 aaPredicted RBP18.25■□□□□ 0.51
HDDC3-201ENST00000330334 ZNF683Q8IZ20 524 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 STK40Q8N2I9 435 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 OR2T34Q8NGX1 318 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 SNX19Q92543 992 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 FAM131CQ96AQ9 280 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 HAPLN3Q96S86 360 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 SIK2Q9H0K1 926 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 ANLNQ9NQW6 1124 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 ANO10Q9NW15 660 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 FANCLQ9NW38 375 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 SERGEFQ9UGK8 458 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 NOCTQ9UK39 431 aaKnown RBP18.25■□□□□ 0.51
HDDC3-201ENST00000330334 USP24Q9UPU5 2620 aa18.25■□□□□ 0.51
HDDC3-201ENST00000330334 IGLV3-10A0A075B6K4 115 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 SPAARA0A1B0GVQ0 90 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 A0A1B0GVT2 93 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 A0A1W2PP55 124 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 A0A1W2PPC4 97 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 GOLGA6L22H0YM25 854 aa18.24■□□□□ 0.51
HDDC3-201ENST00000330334 I6L893 689 aaPredicted RBP18.24■□□□□ 0.51
HDDC3-201ENST00000330334 CBFA2T3O75081 653 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms