RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PPLO60437 1756 aa24.08■■□□□ 1.44
PHGDH-234ENST00000642041 ABCC11Q96J66 1382 aa24.07■■□□□ 1.44
PHGDH-234ENST00000642041 PLEKHH1Q9ULM0 1364 aa24.07■■□□□ 1.44
PHGDH-234ENST00000642041 NINLQ9Y2I6 1382 aa24.07■■□□□ 1.44
PHGDH-234ENST00000642041 TRIM37O94972 964 aa24.07■■□□□ 1.44
PHGDH-234ENST00000642041 FAM196AQ6ZSG2 479 aa24.06■■□□□ 1.44
PHGDH-234ENST00000642041 SPON1Q9HCB6 807 aa24.06■■□□□ 1.44
PHGDH-234ENST00000642041 THSD7AQ9UPZ6 1657 aa24.05■■□□□ 1.44
PHGDH-234ENST00000642041 APBA3O96018 575 aa24.05■■□□□ 1.44
PHGDH-234ENST00000642041 NBPF8Q3BBV2 869 aa24.05■■□□□ 1.44
PHGDH-234ENST00000642041 NBPF14Q5TI25 921 aa24.05■■□□□ 1.44
PHGDH-234ENST00000642041 NRXN1Q9ULB1 1477 aa24.03■■□□□ 1.44
PHGDH-234ENST00000642041 RGPD8O14715 1765 aaPredicted RBP24.02■■□□□ 1.44
PHGDH-234ENST00000642041 COL14A1Q05707 1796 aaKnown RBP24.02■■□□□ 1.44
PHGDH-234ENST00000642041 KCNQ2O43526 872 aa24.02■■□□□ 1.44
PHGDH-234ENST00000642041 RREB1Q92766 1687 aa24■■□□□ 1.43
PHGDH-234ENST00000642041 ZNF784Q8NCA9 323 aaPredicted RBP24■■□□□ 1.43
PHGDH-234ENST00000642041 KNDC1Q76NI1 1749 aa24■■□□□ 1.43
PHGDH-234ENST00000642041 ADGRF5Q8IZF2 1346 aa24■■□□□ 1.43
PHGDH-234ENST00000642041 SENP3-EIF4A1A0A087X0R7 540 aa23.98■■□□□ 1.43
PHGDH-234ENST00000642041 TMEM132EQ6IEE7 984 aa23.98■■□□□ 1.43
PHGDH-234ENST00000642041 SIRT1Q96EB6 747 aa23.98■■□□□ 1.43
PHGDH-234ENST00000642041 NUP188Q5SRE5 1749 aa23.97■■□□□ 1.43
PHGDH-234ENST00000642041 RGL3Q3MIN7 710 aa23.96■■□□□ 1.43
PHGDH-234ENST00000642041 IFT172Q9UG01 1749 aa23.96■■□□□ 1.43
PHGDH-234ENST00000642041 SPATA31A1Q5TZJ5 1347 aa23.94■■□□□ 1.42
PHGDH-234ENST00000642041 DCAF11Q8TEB1 546 aa23.94■■□□□ 1.42
PHGDH-234ENST00000642041 UTRNP46939 3433 aa23.93■■□□□ 1.42
PHGDH-234ENST00000642041 YTHDC2Q9H6S0 1430 aaKnown RBP23.93■■□□□ 1.42
PHGDH-234ENST00000642041 CAMTA1Q9Y6Y1 1673 aa23.92■■□□□ 1.42
PHGDH-234ENST00000642041 SLC24A1O60721 1099 aa23.91■■□□□ 1.42
PHGDH-234ENST00000642041 PMFBP1Q8TBY8 1022 aa23.91■■□□□ 1.42
PHGDH-234ENST00000642041 C1QTNF8P60827 252 aa23.9■■□□□ 1.42
PHGDH-234ENST00000642041 TRPM3Q9HCF6 1732 aaPredicted RBP23.89■■□□□ 1.41
PHGDH-234ENST00000642041 PRDM11Q9NQV5 511 aa23.88■■□□□ 1.41
PHGDH-234ENST00000642041 ALS2Q96Q42 1657 aa23.87■■□□□ 1.41
PHGDH-234ENST00000642041 PDE3BQ13370 1112 aa23.87■■□□□ 1.41
PHGDH-234ENST00000642041 ANKARQ7Z5J8 1434 aa23.86■■□□□ 1.41
PHGDH-234ENST00000642041 HSPA5P11021 654 aaKnown RBP23.86■■□□□ 1.41
PHGDH-234ENST00000642041 KDM2AQ9Y2K7 1162 aa23.85■■□□□ 1.41
PHGDH-234ENST00000642041 GPRASP1Q5JY77 1395 aa23.85■■□□□ 1.41
PHGDH-234ENST00000642041 PIK3C2GO75747 1445 aa23.84■■□□□ 1.41
PHGDH-234ENST00000642041 BARGINQ6ZT62 677 aa23.83■■□□□ 1.41
PHGDH-234ENST00000642041 CARD11Q9BXL7 1154 aa23.82■■□□□ 1.4
PHGDH-234ENST00000642041 STRN4Q9NRL3 753 aa23.81■■□□□ 1.4
PHGDH-234ENST00000642041 CRYBG1Q9Y4K1 1723 aa23.81■■□□□ 1.4
PHGDH-234ENST00000642041 KIAA1210Q9ULL0 1709 aa23.8■■□□□ 1.4
PHGDH-234ENST00000642041 TRPM1Q7Z4N2 1603 aa23.8■■□□□ 1.4
PHGDH-234ENST00000642041 ROCK2O75116 1388 aaKnown RBP23.79■■□□□ 1.4
PHGDH-234ENST00000642041 SAFB2Q14151 953 aaKnown RBP eCLIP23.79■■□□□ 1.4
PHGDH-234ENST00000642041 PRAM1Q96QH2 718 aa23.79■■□□□ 1.4
PHGDH-234ENST00000642041 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
PHGDH-234ENST00000642041 KIAA0232Q92628 1395 aa23.78■■□□□ 1.4
PHGDH-234ENST00000642041 C14orf93Q9H972 538 aaKnown RBP23.78■■□□□ 1.4
PHGDH-234ENST00000642041 CHD4Q14839 1912 aa23.78■■□□□ 1.4
PHGDH-234ENST00000642041 NRKQ7Z2Y5 1582 aa23.78■■□□□ 1.4
PHGDH-234ENST00000642041 CEP350Q5VT06 3117 aa23.77■■□□□ 1.4
PHGDH-234ENST00000642041 CHRNA2Q15822 529 aa23.77■■□□□ 1.4
PHGDH-234ENST00000642041 USP47Q96K76 1375 aa23.77■■□□□ 1.4
PHGDH-234ENST00000642041 C11orf95C9JLR9 678 aaPredicted RBP23.76■■□□□ 1.39
PHGDH-234ENST00000642041 CASZ1Q86V15 1759 aa23.75■■□□□ 1.39
PHGDH-234ENST00000642041 PLSCR1O15162 318 aa23.74■■□□□ 1.39
PHGDH-234ENST00000642041 PAK3O75914 559 aaPredicted RBP23.74■■□□□ 1.39
PHGDH-234ENST00000642041 EVA1CP58658 441 aa23.74■■□□□ 1.39
PHGDH-234ENST00000642041 PTGER2P43116 358 aa23.73■■□□□ 1.39
PHGDH-234ENST00000642041 TCP11L2Q8N4U5 519 aa23.73■■□□□ 1.39
PHGDH-234ENST00000642041 ANO8Q9HCE9 1232 aaPredicted RBP23.73■■□□□ 1.39
PHGDH-234ENST00000642041 DDX10Q13206 875 aaKnown RBP23.72■■□□□ 1.39
PHGDH-234ENST00000642041 SYT17Q9BSW7 474 aa23.72■■□□□ 1.39
PHGDH-234ENST00000642041 POGKQ9P215 609 aa23.72■■□□□ 1.39
PHGDH-234ENST00000642041 SSH2Q76I76 1423 aa23.72■■□□□ 1.39
PHGDH-234ENST00000642041 ANP32CO43423 234 aa23.71■■□□□ 1.39
PHGDH-234ENST00000642041 ZBTB7AO95365 584 aa23.71■■□□□ 1.39
PHGDH-234ENST00000642041 NGDNQ8NEJ9 315 aaKnown RBP23.71■■□□□ 1.39
PHGDH-234ENST00000642041 PDGFDQ9GZP0 370 aaPredicted RBP23.71■■□□□ 1.39
PHGDH-234ENST00000642041 RGPD3A6NKT7 1758 aaPredicted RBP23.7■■□□□ 1.39
PHGDH-234ENST00000642041 RGPD4Q7Z3J3 1758 aa23.7■■□□□ 1.39
PHGDH-234ENST00000642041 MYOM1P52179 1685 aa23.7■■□□□ 1.39
PHGDH-234ENST00000642041 EIF3AQ14152 1382 aaKnown RBP23.7■■□□□ 1.38
PHGDH-234ENST00000642041 PRR36Q9H6K5 1346 aa23.7■■□□□ 1.38
PHGDH-234ENST00000642041 ZC3H6P61129 1189 aaKnown RBP23.7■■□□□ 1.38
PHGDH-234ENST00000642041 CFAP70Q5T0N1 1121 aa23.69■■□□□ 1.38
PHGDH-234ENST00000642041 MIER1Q8N108 512 aa23.69■■□□□ 1.38
PHGDH-234ENST00000642041 FHDC1Q9C0D6 1143 aaPredicted RBP23.69■■□□□ 1.38
PHGDH-234ENST00000642041 THRAP3Q9Y2W1 955 aaKnown RBP23.69■■□□□ 1.38
PHGDH-234ENST00000642041 CCDC7Q96M83 1385 aa23.68■■□□□ 1.38
PHGDH-234ENST00000642041 LARP1Q6PKG0 1096 aaKnown RBP23.68■■□□□ 1.38
PHGDH-234ENST00000642041 DLC1Q96QB1 1528 aa23.68■■□□□ 1.38
PHGDH-234ENST00000642041 ATF5Q9Y2D1 282 aaPredicted RBP23.67■■□□□ 1.38
PHGDH-234ENST00000642041 CDCA8Q53HL2 280 aa23.66■■□□□ 1.38
PHGDH-234ENST00000642041 CCER2I3L3R5 266 aa23.65■■□□□ 1.38
PHGDH-234ENST00000642041 HIRIP3Q9BW71 556 aaPredicted RBP23.65■■□□□ 1.38
PHGDH-234ENST00000642041 TULP4Q9NRJ4 1543 aa23.64■■□□□ 1.38
PHGDH-234ENST00000642041 PHRF1Q9P1Y6 1649 aaKnown RBP23.64■■□□□ 1.38
PHGDH-234ENST00000642041 GIGYF1O75420 1035 aaPredicted RBP23.64■■□□□ 1.37
PHGDH-234ENST00000642041 CENPBP07199 599 aaPredicted RBP23.64■■□□□ 1.37
PHGDH-234ENST00000642041 BCL11BQ9C0K0 894 aaPredicted RBP23.64■■□□□ 1.37
PHGDH-234ENST00000642041 WASHC2AQ641Q2 1341 aa23.63■■□□□ 1.37
PHGDH-234ENST00000642041 OVOS2A0A0G2JMS6 1433 aa23.63■■□□□ 1.37
PHGDH-234ENST00000642041 OVOS2A0A0J9YW53 1432 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms