RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 TESK2Q96S53 571 aa20.04■□□□□ 0.8
SDHD-209ENST00000640554 QTRT2Q9H974 415 aaKnown RBP20.04■□□□□ 0.8
SDHD-209ENST00000640554 USP21Q9UK80 565 aa20.04■□□□□ 0.8
SDHD-209ENST00000640554 RXRBP28702 533 aa20.03■□□□□ 0.8
SDHD-209ENST00000640554 USP47Q96K76 1375 aa20.03■□□□□ 0.8
SDHD-209ENST00000640554 TOPAZ1Q8N9V7 1692 aa20.03■□□□□ 0.8
SDHD-209ENST00000640554 CDCA8Q53HL2 280 aa20.02■□□□□ 0.8
SDHD-209ENST00000640554 ABTB2Q8N961 1025 aa20.02■□□□□ 0.8
SDHD-209ENST00000640554 CABLES1Q8TDN4 633 aa20.02■□□□□ 0.8
SDHD-209ENST00000640554 TRPC5Q9UL62 973 aaPredicted RBP20.02■□□□□ 0.8
SDHD-209ENST00000640554 RBM6P78332 1123 aaKnown RBP20.01■□□□□ 0.79
SDHD-209ENST00000640554 NLRP13Q86W25 1043 aa20.01■□□□□ 0.79
SDHD-209ENST00000640554 TRPM3Q9HCF6 1732 aaPredicted RBP20■□□□□ 0.79
SDHD-209ENST00000640554 TMF1P82094 1093 aa20■□□□□ 0.79
SDHD-209ENST00000640554 USP6P35125 1406 aa19.99■□□□□ 0.79
SDHD-209ENST00000640554 NINLQ9Y2I6 1382 aa19.98■□□□□ 0.79
SDHD-209ENST00000640554 UNC5CLQ8IV45 518 aa19.98■□□□□ 0.79
SDHD-209ENST00000640554 TERF2IPQ9NYB0 399 aa19.98■□□□□ 0.79
SDHD-209ENST00000640554 HDGFL2Q7Z4V5 671 aaPredicted RBP19.97■□□□□ 0.79
SDHD-209ENST00000640554 TMC1Q8TDI8 760 aa19.97■□□□□ 0.79
SDHD-209ENST00000640554 TTC21AQ8NDW8 1320 aa19.97■□□□□ 0.79
SDHD-209ENST00000640554 ALS2Q96Q42 1657 aa19.97■□□□□ 0.79
SDHD-209ENST00000640554 CPSF1Q10570 1443 aaKnown RBP19.96■□□□□ 0.79
SDHD-209ENST00000640554 SSH2Q76I76 1423 aa19.95■□□□□ 0.78
SDHD-209ENST00000640554 BCL9LQ86UU0 1499 aa19.95■□□□□ 0.78
SDHD-209ENST00000640554 CDK12Q9NYV4 1490 aaPredicted RBP19.95■□□□□ 0.78
SDHD-209ENST00000640554 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
SDHD-209ENST00000640554 PLEKHG5O94827 1062 aa19.95■□□□□ 0.78
SDHD-209ENST00000640554 KTN1Q86UP2 1357 aaKnown RBP19.95■□□□□ 0.78
SDHD-209ENST00000640554 SLIT2O94813 1529 aa19.94■□□□□ 0.78
SDHD-209ENST00000640554 NLRP6P59044 892 aa19.94■□□□□ 0.78
SDHD-209ENST00000640554 EIF4G2P78344 907 aaKnown RBP eCLIP19.94■□□□□ 0.78
SDHD-209ENST00000640554 SLC12A5Q9H2X9 1139 aa19.94■□□□□ 0.78
SDHD-209ENST00000640554 TTC21BQ7Z4L5 1316 aa19.94■□□□□ 0.78
SDHD-209ENST00000640554 NUTM2GQ5VZR2 741 aa19.93■□□□□ 0.78
SDHD-209ENST00000640554 PRDM11Q9NQV5 511 aa19.93■□□□□ 0.78
SDHD-209ENST00000640554 USP19O94966 1318 aa19.93■□□□□ 0.78
SDHD-209ENST00000640554 ATRNO75882 1429 aa19.93■□□□□ 0.78
SDHD-209ENST00000640554 GCP02774 474 aa19.91■□□□□ 0.78
SDHD-209ENST00000640554 GJD4Q96KN9 370 aaPredicted RBP19.91■□□□□ 0.78
SDHD-209ENST00000640554 VPS72Q15906 364 aa19.9■□□□□ 0.78
SDHD-209ENST00000640554 CPDO75976 1380 aa19.89■□□□□ 0.77
SDHD-209ENST00000640554 KCNH5Q8NCM2 988 aa19.89■□□□□ 0.77
SDHD-209ENST00000640554 MARF1Q9Y4F3 1742 aaKnown RBP19.89■□□□□ 0.77
SDHD-209ENST00000640554 BTG4Q9NY30 223 aa19.88■□□□□ 0.77
SDHD-209ENST00000640554 KIAA0232Q92628 1395 aa19.87■□□□□ 0.77
SDHD-209ENST00000640554 ZC3H6P61129 1189 aaKnown RBP19.87■□□□□ 0.77
SDHD-209ENST00000640554 EDC4Q6P2E9 1401 aaKnown RBP19.86■□□□□ 0.77
SDHD-209ENST00000640554 CD163L1Q9NR16 1453 aa19.85■□□□□ 0.77
SDHD-209ENST00000640554 USP31Q70CQ4 1352 aa19.84■□□□□ 0.77
SDHD-209ENST00000640554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.84■□□□□ 0.77
SDHD-209ENST00000640554 ABCA3Q99758 1704 aa19.84■□□□□ 0.77
SDHD-209ENST00000640554 A0A1W2PP64 1363 aa19.83■□□□□ 0.77
SDHD-209ENST00000640554 ANKRD36BQ8N2N9 1353 aa19.83■□□□□ 0.77
SDHD-209ENST00000640554 HSPA5P11021 654 aaKnown RBP19.83■□□□□ 0.77
SDHD-209ENST00000640554 CCDC9Q9Y3X0 531 aaKnown RBP19.83■□□□□ 0.77
SDHD-209ENST00000640554 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.76
SDHD-209ENST00000640554 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.82■□□□□ 0.76
SDHD-209ENST00000640554 NWD2Q9ULI1 1742 aa19.82■□□□□ 0.76
SDHD-209ENST00000640554 ONECUT3O60422 494 aaPredicted RBP19.82■□□□□ 0.76
SDHD-209ENST00000640554 AKAP12Q02952 1782 aa19.81■□□□□ 0.76
SDHD-209ENST00000640554 EVA1CP58658 441 aa19.81■□□□□ 0.76
SDHD-209ENST00000640554 CHRNA2Q15822 529 aa19.81■□□□□ 0.76
SDHD-209ENST00000640554 CRYBG1Q9Y4K1 1723 aa19.81■□□□□ 0.76
SDHD-209ENST00000640554 AATKQ6ZMQ8 1374 aa19.81■□□□□ 0.76
SDHD-209ENST00000640554 SLIT3O75094 1523 aa19.8■□□□□ 0.76
SDHD-209ENST00000640554 RGS12O14924 1447 aa19.79■□□□□ 0.76
SDHD-209ENST00000640554 ARHGEF25Q86VW2 580 aa19.79■□□□□ 0.76
SDHD-209ENST00000640554 NME9Q86XW9 330 aa19.79■□□□□ 0.76
SDHD-209ENST00000640554 PHRF1Q9P1Y6 1649 aaKnown RBP19.78■□□□□ 0.76
SDHD-209ENST00000640554 SPATA31A5Q5VU36 1347 aa19.77■□□□□ 0.76
SDHD-209ENST00000640554 SPATA31A7Q8IWB4 1347 aa19.77■□□□□ 0.76
SDHD-209ENST00000640554 NRKQ7Z2Y5 1582 aa19.77■□□□□ 0.76
SDHD-209ENST00000640554 MON2Q7Z3U7 1717 aa19.76■□□□□ 0.75
SDHD-209ENST00000640554 PIK3C2AO00443 1686 aa19.76■□□□□ 0.75
SDHD-209ENST00000640554 PLCH1Q4KWH8 1693 aa19.76■□□□□ 0.75
SDHD-209ENST00000640554 COG3Q96JB2 828 aa19.76■□□□□ 0.75
SDHD-209ENST00000640554 SEPT12Q8IYM1 358 aa19.75■□□□□ 0.75
SDHD-209ENST00000640554 STRN4Q9NRL3 753 aa19.75■□□□□ 0.75
SDHD-209ENST00000640554 THRAP3Q9Y2W1 955 aaKnown RBP19.74■□□□□ 0.75
SDHD-209ENST00000640554 SPATA31A1Q5TZJ5 1347 aa19.74■□□□□ 0.75
SDHD-209ENST00000640554 ZRANB1Q9UGI0 708 aa19.73■□□□□ 0.75
SDHD-209ENST00000640554 ZBTB7CA1YPR0 619 aa19.72■□□□□ 0.75
SDHD-209ENST00000640554 GLI3P10071 1580 aa19.72■□□□□ 0.75
SDHD-209ENST00000640554 CAMTA1Q9Y6Y1 1673 aa19.71■□□□□ 0.75
SDHD-209ENST00000640554 FYB1O15117 783 aa19.71■□□□□ 0.75
SDHD-209ENST00000640554 SOX12O15370 315 aa19.71■□□□□ 0.75
SDHD-209ENST00000640554 FAM98CQ17RN3 349 aaKnown RBP19.71■□□□□ 0.75
SDHD-209ENST00000640554 BARGINQ6ZT62 677 aa19.71■□□□□ 0.75
SDHD-209ENST00000640554 UPF1Q92900 1129 aaKnown RBP eCLIP19.71■□□□□ 0.75
SDHD-209ENST00000640554 OVOS2A0A0J9YW53 1432 aa19.7■□□□□ 0.74
SDHD-209ENST00000640554 OVOS2Q6IE36 1432 aa19.7■□□□□ 0.74
SDHD-209ENST00000640554 LARP1Q6PKG0 1096 aaKnown RBP19.7■□□□□ 0.74
SDHD-209ENST00000640554 CCDC125Q86Z20 511 aa19.7■□□□□ 0.74
SDHD-209ENST00000640554 TCP11L2Q8N4U5 519 aa19.7■□□□□ 0.74
SDHD-209ENST00000640554 POLR3GLQ9BT43 218 aa19.7■□□□□ 0.74
SDHD-209ENST00000640554 NRAPQ86VF7 1730 aa19.7■□□□□ 0.74
SDHD-209ENST00000640554 CARD14Q9BXL6 1004 aa19.69■□□□□ 0.74
SDHD-209ENST00000640554 COL5A2P05997 1499 aaPredicted RBP19.68■□□□□ 0.74
SDHD-209ENST00000640554 NFAT5O94916 1531 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms