RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 SIRT1Q96EB6 747 aa17.29■□□□□ 0.36
MECP2-226ENST00000640414 PIK3C2GO75747 1445 aa17.29■□□□□ 0.36
MECP2-226ENST00000640414 NBPF8Q3BBV2 869 aa17.28■□□□□ 0.36
MECP2-226ENST00000640414 NBPF14Q5TI25 921 aa17.28■□□□□ 0.36
MECP2-226ENST00000640414 SPON1Q9HCB6 807 aa17.28■□□□□ 0.36
MECP2-226ENST00000640414 CRYBG1Q9Y4K1 1723 aa17.27■□□□□ 0.36
MECP2-226ENST00000640414 SPATA31A1Q5TZJ5 1347 aa17.27■□□□□ 0.36
MECP2-226ENST00000640414 KCNQ2O43526 872 aa17.27■□□□□ 0.36
MECP2-226ENST00000640414 ANKRD30BQ9BXX2 1392 aa17.27■□□□□ 0.35
MECP2-226ENST00000640414 RGL3Q3MIN7 710 aa17.26■□□□□ 0.35
MECP2-226ENST00000640414 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
MECP2-226ENST00000640414 SPATA31E1Q6ZUB1 1445 aa17.26■□□□□ 0.35
MECP2-226ENST00000640414 ANKARQ7Z5J8 1434 aa17.24■□□□□ 0.35
MECP2-226ENST00000640414 PRDM11Q9NQV5 511 aa17.24■□□□□ 0.35
MECP2-226ENST00000640414 SAFB2Q14151 953 aaKnown RBP eCLIP17.23■□□□□ 0.35
MECP2-226ENST00000640414 ZNF784Q8NCA9 323 aaPredicted RBP17.23■□□□□ 0.35
MECP2-226ENST00000640414 GPRASP1Q5JY77 1395 aa17.21■□□□□ 0.35
MECP2-226ENST00000640414 SENP3-EIF4A1A0A087X0R7 540 aa17.21■□□□□ 0.35
MECP2-226ENST00000640414 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
MECP2-226ENST00000640414 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.34
MECP2-226ENST00000640414 IFFO2Q5TF58 517 aa17.2■□□□□ 0.34
MECP2-226ENST00000640414 STRN4Q9NRL3 753 aa17.2■□□□□ 0.34
MECP2-226ENST00000640414 KIAA0232Q92628 1395 aa17.19■□□□□ 0.34
MECP2-226ENST00000640414 PDE3BQ13370 1112 aa17.19■□□□□ 0.34
MECP2-226ENST00000640414 CHRNA2Q15822 529 aa17.19■□□□□ 0.34
MECP2-226ENST00000640414 C14orf93Q9H972 538 aaKnown RBP17.19■□□□□ 0.34
MECP2-226ENST00000640414 USP35Q9P2H5 1018 aa17.18■□□□□ 0.34
MECP2-226ENST00000640414 NRKQ7Z2Y5 1582 aa17.18■□□□□ 0.34
MECP2-226ENST00000640414 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
MECP2-226ENST00000640414 BARGINQ6ZT62 677 aa17.17■□□□□ 0.34
MECP2-226ENST00000640414 PRR36Q9H6K5 1346 aa17.17■□□□□ 0.34
MECP2-226ENST00000640414 CASZ1Q86V15 1759 aa17.16■□□□□ 0.34
MECP2-226ENST00000640414 CFAP70Q5T0N1 1121 aa17.16■□□□□ 0.34
MECP2-226ENST00000640414 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
MECP2-226ENST00000640414 DLC1Q96QB1 1528 aa17.15■□□□□ 0.34
MECP2-226ENST00000640414 PHRF1Q9P1Y6 1649 aaKnown RBP17.14■□□□□ 0.33
MECP2-226ENST00000640414 SSH2Q76I76 1423 aa17.14■□□□□ 0.33
MECP2-226ENST00000640414 C1QTNF8P60827 252 aa17.14■□□□□ 0.33
MECP2-226ENST00000640414 POGKQ9P215 609 aa17.14■□□□□ 0.33
MECP2-226ENST00000640414 MYOM1P52179 1685 aa17.13■□□□□ 0.33
MECP2-226ENST00000640414 TULP4Q9NRJ4 1543 aa17.13■□□□□ 0.33
MECP2-226ENST00000640414 HIRIP3Q9BW71 556 aaPredicted RBP17.13■□□□□ 0.33
MECP2-226ENST00000640414 ZC3H6P61129 1189 aaKnown RBP17.12■□□□□ 0.33
MECP2-226ENST00000640414 NGDNQ8NEJ9 315 aaKnown RBP17.12■□□□□ 0.33
MECP2-226ENST00000640414 PDGFDQ9GZP0 370 aaPredicted RBP17.12■□□□□ 0.33
MECP2-226ENST00000640414 ANO8Q9HCE9 1232 aaPredicted RBP17.12■□□□□ 0.33
MECP2-226ENST00000640414 RGPD3A6NKT7 1758 aaPredicted RBP17.11■□□□□ 0.33
MECP2-226ENST00000640414 RGPD4Q7Z3J3 1758 aa17.11■□□□□ 0.33
MECP2-226ENST00000640414 EVA1CP58658 441 aa17.11■□□□□ 0.33
MECP2-226ENST00000640414 EIF3AQ14152 1382 aaKnown RBP17.11■□□□□ 0.33
MECP2-226ENST00000640414 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
MECP2-226ENST00000640414 TCP11L2Q8N4U5 519 aa17.1■□□□□ 0.33
MECP2-226ENST00000640414 ZBTB7AO95365 584 aa17.09■□□□□ 0.33
MECP2-226ENST00000640414 PTGER2P43116 358 aa17.09■□□□□ 0.33
MECP2-226ENST00000640414 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
MECP2-226ENST00000640414 PARP4Q9UKK3 1724 aaKnown RBP17.09■□□□□ 0.33
MECP2-226ENST00000640414 PEAK1Q9H792 1746 aa17.08■□□□□ 0.32
MECP2-226ENST00000640414 WASLO00401 505 aaPredicted RBP17.07■□□□□ 0.32
MECP2-226ENST00000640414 PLSCR1O15162 318 aa17.07■□□□□ 0.32
MECP2-226ENST00000640414 NUTM2GQ5VZR2 741 aa17.07■□□□□ 0.32
MECP2-226ENST00000640414 SYT17Q9BSW7 474 aa17.07■□□□□ 0.32
MECP2-226ENST00000640414 CHD4Q14839 1912 aa17.07■□□□□ 0.32
MECP2-226ENST00000640414 LMO7Q8WWI1 1683 aa17.07■□□□□ 0.32
MECP2-226ENST00000640414 ADGRB1O14514 1584 aa17.06■□□□□ 0.32
MECP2-226ENST00000640414 FHDC1Q9C0D6 1143 aaPredicted RBP17.06■□□□□ 0.32
MECP2-226ENST00000640414 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
MECP2-226ENST00000640414 ATP7BP35670 1465 aa17.05■□□□□ 0.32
MECP2-226ENST00000640414 OVOS2A0A0G2JMS6 1433 aa17.05■□□□□ 0.32
MECP2-226ENST00000640414 OVOS2A0A0J9YW53 1432 aa17.05■□□□□ 0.32
MECP2-226ENST00000640414 OVOS2Q6IE36 1432 aa17.05■□□□□ 0.32
MECP2-226ENST00000640414 SBF2Q86WG5 1849 aa17.05■□□□□ 0.32
MECP2-226ENST00000640414 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
MECP2-226ENST00000640414 TRAK1Q9UPV9 953 aa17.05■□□□□ 0.32
MECP2-226ENST00000640414 THRAP3Q9Y2W1 955 aaKnown RBP17.05■□□□□ 0.32
MECP2-226ENST00000640414 C11orf95C9JLR9 678 aaPredicted RBP17.04■□□□□ 0.32
MECP2-226ENST00000640414 PTF1AQ7RTS3 328 aa17.04■□□□□ 0.32
MECP2-226ENST00000640414 MPHOSPH9Q99550 1183 aa17.04■□□□□ 0.32
MECP2-226ENST00000640414 UTRNP46939 3433 aa17.04■□□□□ 0.32
MECP2-226ENST00000640414 ITSN1Q15811 1721 aa17.04■□□□□ 0.32
MECP2-226ENST00000640414 PROM2Q8N271 834 aa17.03■□□□□ 0.32
MECP2-226ENST00000640414 BCL11BQ9C0K0 894 aaPredicted RBP17.03■□□□□ 0.32
MECP2-226ENST00000640414 CPDO75976 1380 aa17.02■□□□□ 0.31
MECP2-226ENST00000640414 LRRC37A3O60309 1634 aa17.01■□□□□ 0.31
MECP2-226ENST00000640414 COL5A2P05997 1499 aaPredicted RBP17■□□□□ 0.31
MECP2-226ENST00000640414 NUDT16Q96DE0 195 aaKnown RBP16.99■□□□□ 0.31
MECP2-226ENST00000640414 SGIP1Q9BQI5 828 aa16.99■□□□□ 0.31
MECP2-226ENST00000640414 CRB1P82279 1406 aa16.98■□□□□ 0.31
MECP2-226ENST00000640414 MTFR1LQ9H019 292 aa16.97■□□□□ 0.31
MECP2-226ENST00000640414 STK32BQ9NY57 414 aa16.97■□□□□ 0.31
MECP2-226ENST00000640414 POLR3AO14802 1390 aaPredicted RBP16.97■□□□□ 0.31
MECP2-226ENST00000640414 USP19O94966 1318 aa16.96■□□□□ 0.31
MECP2-226ENST00000640414 GIGYF1O75420 1035 aaPredicted RBP16.96■□□□□ 0.31
MECP2-226ENST00000640414 SLC15A2Q16348 729 aa16.96■□□□□ 0.31
MECP2-226ENST00000640414 DDB1Q16531 1140 aa16.96■□□□□ 0.31
MECP2-226ENST00000640414 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
MECP2-226ENST00000640414 PCGF6Q9BYE7 350 aa16.96■□□□□ 0.31
MECP2-226ENST00000640414 ACEP12821 1306 aa16.96■□□□□ 0.3
MECP2-226ENST00000640414 TOPAZ1Q8N9V7 1692 aa16.95■□□□□ 0.3
MECP2-226ENST00000640414 TXNRD1Q16881 649 aa16.95■□□□□ 0.3
MECP2-226ENST00000640414 MAP3K5Q99683 1374 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms