RNA–Protein interactions for RNA: ENST00000639794.1

SPIN3-228, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,681 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-228ENST00000639794 TESK2Q96S53 571 aa23.7■■□□□ 1.38
SPIN3-228ENST00000639794 MARF1Q9Y4F3 1742 aaKnown RBP23.68■■□□□ 1.38
SPIN3-228ENST00000639794 ABCA3Q99758 1704 aa23.67■■□□□ 1.38
SPIN3-228ENST00000639794 ATAD2Q6PL18 1390 aa23.67■■□□□ 1.38
SPIN3-228ENST00000639794 ZNF772Q68DY9 489 aaPredicted RBP23.64■■□□□ 1.38
SPIN3-228ENST00000639794 ABTB2Q8N961 1025 aa23.64■■□□□ 1.38
SPIN3-228ENST00000639794 SLC12A5Q9H2X9 1139 aa23.63■■□□□ 1.37
SPIN3-228ENST00000639794 USP6P35125 1406 aa23.62■■□□□ 1.37
SPIN3-228ENST00000639794 AKAP12Q02952 1782 aa23.62■■□□□ 1.37
SPIN3-228ENST00000639794 USP21Q9UK80 565 aa23.61■■□□□ 1.37
SPIN3-228ENST00000639794 TMF1P82094 1093 aa23.6■■□□□ 1.37
SPIN3-228ENST00000639794 POLR3GLQ9BT43 218 aa23.59■■□□□ 1.37
SPIN3-228ENST00000639794 QTRT2Q9H974 415 aaKnown RBP23.59■■□□□ 1.37
SPIN3-228ENST00000639794 KTN1Q86UP2 1357 aaKnown RBP23.59■■□□□ 1.37
SPIN3-228ENST00000639794 CRYBG1Q9Y4K1 1723 aa23.58■■□□□ 1.37
SPIN3-228ENST00000639794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.57■■□□□ 1.36
SPIN3-228ENST00000639794 HSPA5P11021 654 aaKnown RBP23.57■■□□□ 1.36
SPIN3-228ENST00000639794 PHRF1Q9P1Y6 1649 aaKnown RBP23.56■■□□□ 1.36
SPIN3-228ENST00000639794 ZC3H6P61129 1189 aaKnown RBP23.56■■□□□ 1.36
SPIN3-228ENST00000639794 EIF4G2P78344 907 aaKnown RBP eCLIP23.56■■□□□ 1.36
SPIN3-228ENST00000639794 NLRP6P59044 892 aa23.55■■□□□ 1.36
SPIN3-228ENST00000639794 FNBP4Q8N3X1 1017 aaPredicted RBP23.55■■□□□ 1.36
SPIN3-228ENST00000639794 ZNF692Q9BU19 519 aaPredicted RBP23.55■■□□□ 1.36
SPIN3-228ENST00000639794 CPSF1Q10570 1443 aaKnown RBP23.54■■□□□ 1.36
SPIN3-228ENST00000639794 ZBTB7CA1YPR0 619 aa23.54■■□□□ 1.36
SPIN3-228ENST00000639794 FAM83GA6ND36 823 aa23.54■■□□□ 1.36
SPIN3-228ENST00000639794 HDGFL2Q7Z4V5 671 aaPredicted RBP23.54■■□□□ 1.36
SPIN3-228ENST00000639794 PLCH1Q4KWH8 1693 aa23.54■■□□□ 1.36
SPIN3-228ENST00000639794 TTC21BQ7Z4L5 1316 aa23.54■■□□□ 1.36
SPIN3-228ENST00000639794 MON2Q7Z3U7 1717 aa23.54■■□□□ 1.36
SPIN3-228ENST00000639794 SOX12O15370 315 aa23.54■■□□□ 1.36
SPIN3-228ENST00000639794 RXRBP28702 533 aa23.54■■□□□ 1.36
SPIN3-228ENST00000639794 CD163L1Q9NR16 1453 aa23.54■■□□□ 1.36
SPIN3-228ENST00000639794 PIK3C2AO00443 1686 aa23.54■■□□□ 1.36
SPIN3-228ENST00000639794 SLC24A1O60721 1099 aa23.53■■□□□ 1.36
SPIN3-228ENST00000639794 CHRNA2Q15822 529 aa23.53■■□□□ 1.36
SPIN3-228ENST00000639794 NLRP13Q86W25 1043 aa23.53■■□□□ 1.36
SPIN3-228ENST00000639794 PRDM11Q9NQV5 511 aa23.52■■□□□ 1.36
SPIN3-228ENST00000639794 A0A1W2PP64 1363 aa23.52■■□□□ 1.36
SPIN3-228ENST00000639794 BCL9LQ86UU0 1499 aa23.52■■□□□ 1.36
SPIN3-228ENST00000639794 NRKQ7Z2Y5 1582 aa23.51■■□□□ 1.35
SPIN3-228ENST00000639794 TERF2IPQ9NYB0 399 aa23.51■■□□□ 1.35
SPIN3-228ENST00000639794 KIAA0232Q92628 1395 aa23.51■■□□□ 1.35
SPIN3-228ENST00000639794 SSH2Q76I76 1423 aa23.51■■□□□ 1.35
SPIN3-228ENST00000639794 ZRANB1Q9UGI0 708 aa23.51■■□□□ 1.35
SPIN3-228ENST00000639794 TRPC5Q9UL62 973 aaPredicted RBP23.5■■□□□ 1.35
SPIN3-228ENST00000639794 CCDC9Q9Y3X0 531 aaKnown RBP23.5■■□□□ 1.35
SPIN3-228ENST00000639794 PUS7Q96PZ0 661 aaKnown RBP23.49■■□□□ 1.35
SPIN3-228ENST00000639794 BTG4Q9NY30 223 aa23.49■■□□□ 1.35
SPIN3-228ENST00000639794 SLIT2O94813 1529 aa23.48■■□□□ 1.35
SPIN3-228ENST00000639794 BRD4O60885 1362 aaPredicted RBP23.48■■□□□ 1.35
SPIN3-228ENST00000639794 NME9Q86XW9 330 aa23.48■■□□□ 1.35
SPIN3-228ENST00000639794 UNC5CLQ8IV45 518 aa23.48■■□□□ 1.35
SPIN3-228ENST00000639794 USP19O94966 1318 aa23.47■■□□□ 1.35
SPIN3-228ENST00000639794 GCP02774 474 aa23.47■■□□□ 1.35
SPIN3-228ENST00000639794 CDCA8Q53HL2 280 aa23.47■■□□□ 1.35
SPIN3-228ENST00000639794 COL14A1Q05707 1796 aaKnown RBP23.46■■□□□ 1.35
SPIN3-228ENST00000639794 TTC21AQ8NDW8 1320 aa23.46■■□□□ 1.35
SPIN3-228ENST00000639794 RBM6P78332 1123 aaKnown RBP23.46■■□□□ 1.35
SPIN3-228ENST00000639794 ATRNO75882 1429 aa23.46■■□□□ 1.35
SPIN3-228ENST00000639794 SOCS7O14512 581 aa23.45■■□□□ 1.34
SPIN3-228ENST00000639794 NWD2Q9ULI1 1742 aa23.44■■□□□ 1.34
SPIN3-228ENST00000639794 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.44■■□□□ 1.34
SPIN3-228ENST00000639794 MYOM1P52179 1685 aa23.44■■□□□ 1.34
SPIN3-228ENST00000639794 STRN4Q9NRL3 753 aa23.44■■□□□ 1.34
SPIN3-228ENST00000639794 NINLQ9Y2I6 1382 aa23.43■■□□□ 1.34
SPIN3-228ENST00000639794 EDC4Q6P2E9 1401 aaKnown RBP23.43■■□□□ 1.34
SPIN3-228ENST00000639794 GJD4Q96KN9 370 aaPredicted RBP23.41■■□□□ 1.34
SPIN3-228ENST00000639794 NRAPQ86VF7 1730 aa23.41■■□□□ 1.34
SPIN3-228ENST00000639794 RGS12O14924 1447 aa23.41■■□□□ 1.34
SPIN3-228ENST00000639794 ANKRD36BQ8N2N9 1353 aa23.41■■□□□ 1.34
SPIN3-228ENST00000639794 SLIT3O75094 1523 aa23.39■■□□□ 1.34
SPIN3-228ENST00000639794 C11orf95C9JLR9 678 aaPredicted RBP23.38■■□□□ 1.33
SPIN3-228ENST00000639794 GLI3P10071 1580 aa23.38■■□□□ 1.33
SPIN3-228ENST00000639794 A0A0G2JS52 829 aa23.37■■□□□ 1.33
SPIN3-228ENST00000639794 EVA1CP58658 441 aa23.37■■□□□ 1.33
SPIN3-228ENST00000639794 MYT1Q01538 1121 aa23.37■■□□□ 1.33
SPIN3-228ENST00000639794 VPS72Q15906 364 aa23.37■■□□□ 1.33
SPIN3-228ENST00000639794 USP35Q9P2H5 1018 aa23.36■■□□□ 1.33
SPIN3-228ENST00000639794 CAMTA1Q9Y6Y1 1673 aa23.35■■□□□ 1.33
SPIN3-228ENST00000639794 CPDO75976 1380 aa23.35■■□□□ 1.33
SPIN3-228ENST00000639794 KCNH5Q8NCM2 988 aa23.35■■□□□ 1.33
SPIN3-228ENST00000639794 RGPD5Q99666 1765 aa23.34■■□□□ 1.33
SPIN3-228ENST00000639794 GGNBP2Q9H3C7 697 aa23.34■■□□□ 1.33
SPIN3-228ENST00000639794 CARD14Q9BXL6 1004 aa23.33■■□□□ 1.33
SPIN3-228ENST00000639794 NSD3Q9BZ95 1437 aa23.33■■□□□ 1.32
SPIN3-228ENST00000639794 CDK12Q9NYV4 1490 aaPredicted RBP23.33■■□□□ 1.32
SPIN3-228ENST00000639794 FBLN1P23142 703 aa23.32■■□□□ 1.32
SPIN3-228ENST00000639794 FAM98CQ17RN3 349 aaKnown RBP23.32■■□□□ 1.32
SPIN3-228ENST00000639794 LMO7Q8WWI1 1683 aa23.32■■□□□ 1.32
SPIN3-228ENST00000639794 USP31Q70CQ4 1352 aa23.32■■□□□ 1.32
SPIN3-228ENST00000639794 NFAT5O94916 1531 aa23.32■■□□□ 1.32
SPIN3-228ENST00000639794 COG3Q96JB2 828 aa23.32■■□□□ 1.32
SPIN3-228ENST00000639794 LTN1O94822 1766 aa23.31■■□□□ 1.32
SPIN3-228ENST00000639794 KIF20BQ96Q89 1820 aa23.31■■□□□ 1.32
SPIN3-228ENST00000639794 LARP1Q6PKG0 1096 aaKnown RBP23.31■■□□□ 1.32
SPIN3-228ENST00000639794 ARHGEF25Q86VW2 580 aa23.3■■□□□ 1.32
SPIN3-228ENST00000639794 AXIN2Q9Y2T1 843 aa23.3■■□□□ 1.32
SPIN3-228ENST00000639794 OVOS2A0A0J9YW53 1432 aa23.3■■□□□ 1.32
SPIN3-228ENST00000639794 OVOS2Q6IE36 1432 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms