RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-245ENST00000639702 CCDC158Q5M9N0 1113 aa14.69□□□□□ -0.06
RBM39-245ENST00000639702 ZNF592Q92610 1267 aa14.69□□□□□ -0.06
RBM39-245ENST00000639702 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.69□□□□□ -0.062e-8■□□□□ 11.3
RBM39-245ENST00000639702 SURF6O75683 361 aaKnown RBP14.69□□□□□ -0.06
RBM39-245ENST00000639702 CCT4P50991 539 aaKnown RBP14.69□□□□□ -0.06
RBM39-245ENST00000639702 CDR1P51861 262 aa14.69□□□□□ -0.06
RBM39-245ENST00000639702 TWISTNBQ3B726 338 aaPredicted RBP14.69□□□□□ -0.06
RBM39-245ENST00000639702 CNKSR2Q8WXI2 1034 aa14.69□□□□□ -0.06
RBM39-245ENST00000639702 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
RBM39-245ENST00000639702 EPS15P42566 896 aa14.68□□□□□ -0.06
RBM39-245ENST00000639702 TTC39AQ5SRH9 613 aa14.68□□□□□ -0.06
RBM39-245ENST00000639702 TROQ12816 1431 aaPredicted RBP14.68□□□□□ -0.06
RBM39-245ENST00000639702 CDK19Q9BWU1 502 aa14.68□□□□□ -0.06
RBM39-245ENST00000639702 CABP4P57796 275 aa14.67□□□□□ -0.06
RBM39-245ENST00000639702 CT47A1Q5JQC4 288 aaPredicted RBP14.67□□□□□ -0.06
RBM39-245ENST00000639702 RTEL1-TNFRSF6BF6WH68 1400 aa14.67□□□□□ -0.06
RBM39-245ENST00000639702 PDCP20941 246 aa14.67□□□□□ -0.06
RBM39-245ENST00000639702 ACBD3Q9H3P7 528 aa14.67□□□□□ -0.06
RBM39-245ENST00000639702 IKQ13123 557 aaPredicted RBP14.66□□□□□ -0.06
RBM39-245ENST00000639702 PDE3AQ14432 1141 aa14.66□□□□□ -0.06
RBM39-245ENST00000639702 ODF2Q5BJF6 829 aa14.66□□□□□ -0.06
RBM39-245ENST00000639702 TEX35Q5T0J7 233 aa14.66□□□□□ -0.06
RBM39-245ENST00000639702 CNNM1Q9NRU3 951 aa14.66□□□□□ -0.06
RBM39-245ENST00000639702 DNAJC2Q99543 621 aaKnown RBP14.66□□□□□ -0.06
RBM39-245ENST00000639702 FOSBP53539 338 aa14.66□□□□□ -0.06
RBM39-245ENST00000639702 ATAD2Q6PL18 1390 aa14.66□□□□□ -0.06
RBM39-245ENST00000639702 ZNF396Q96N95 335 aaPredicted RBP14.65□□□□□ -0.06
RBM39-245ENST00000639702 TXLNAP40222 546 aa14.65□□□□□ -0.06
RBM39-245ENST00000639702 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
RBM39-245ENST00000639702 AK7Q96M32 723 aa14.65□□□□□ -0.06
RBM39-245ENST00000639702 PHF23Q9BUL5 403 aaPredicted RBP14.65□□□□□ -0.06
RBM39-245ENST00000639702 NAP1L1P55209 391 aaKnown RBP14.65□□□□□ -0.06
RBM39-245ENST00000639702 WDR63Q8IWG1 891 aa14.65□□□□□ -0.06
RBM39-245ENST00000639702 SUPT6HQ7KZ85 1726 aaKnown RBP14.65□□□□□ -0.06
RBM39-245ENST00000639702 ANKRD30BQ9BXX2 1392 aa14.65□□□□□ -0.06
RBM39-245ENST00000639702 EXOSC9Q06265 439 aaKnown RBP14.65□□□□□ -0.06
RBM39-245ENST00000639702 ZSCAN25Q6NSZ9 544 aa14.65□□□□□ -0.06
RBM39-245ENST00000639702 PIP4K2AP48426 406 aaPredicted RBP14.64□□□□□ -0.07
RBM39-245ENST00000639702 KRI1Q8N9T8 703 aaKnown RBP14.64□□□□□ -0.07
RBM39-245ENST00000639702 ARGLU1Q9NWB6 273 aaPredicted RBP14.64□□□□□ -0.07
RBM39-245ENST00000639702 SF3B2Q13435 895 aaKnown RBP14.64□□□□□ -0.07
RBM39-245ENST00000639702 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
RBM39-245ENST00000639702 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.64□□□□□ -0.07
RBM39-245ENST00000639702 RDXP35241 583 aaKnown RBP14.64□□□□□ -0.07
RBM39-245ENST00000639702 RUFY1Q96T51 708 aa14.64□□□□□ -0.07
RBM39-245ENST00000639702 STRN4Q9NRL3 753 aa14.64□□□□□ -0.07
RBM39-245ENST00000639702 RABEP1Q15276 862 aa14.64□□□□□ -0.07
RBM39-245ENST00000639702 WWC2Q6AWC2 1192 aa14.64□□□□□ -0.07
RBM39-245ENST00000639702 CCDC173Q0VFZ6 552 aa14.63□□□□□ -0.07
RBM39-245ENST00000639702 HDGFL1Q5TGJ6 251 aa14.63□□□□□ -0.07
RBM39-245ENST00000639702 CDK5RAP3Q96JB5 506 aa14.63□□□□□ -0.07
RBM39-245ENST00000639702 HSP90AA2PQ14568 343 aaPredicted RBP14.63□□□□□ -0.07
RBM39-245ENST00000639702 ANKRD1Q15327 319 aa14.63□□□□□ -0.07
RBM39-245ENST00000639702 NACAP1Q9BZK3 213 aa14.63□□□□□ -0.07
RBM39-245ENST00000639702 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
RBM39-245ENST00000639702 ERBINQ96RT1 1412 aa14.63□□□□□ -0.07
RBM39-245ENST00000639702 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
RBM39-245ENST00000639702 OFD1O75665 1012 aa14.63□□□□□ -0.07
RBM39-245ENST00000639702 TOM1L2Q6ZVM7 507 aa14.63□□□□□ -0.07
RBM39-245ENST00000639702 SDF4Q9BRK5 362 aa14.63□□□□□ -0.07
RBM39-245ENST00000639702 MBD3O95983 291 aa14.62□□□□□ -0.07
RBM39-245ENST00000639702 CCDC39Q9UFE4 941 aa14.62□□□□□ -0.07
RBM39-245ENST00000639702 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.62□□□□□ -0.07
RBM39-245ENST00000639702 TOPBP1Q92547 1522 aa14.62□□□□□ -0.07
RBM39-245ENST00000639702 MNS1Q8NEH6 495 aa14.62□□□□□ -0.07
RBM39-245ENST00000639702 SRCIN1Q9C0H9 1055 aa14.62□□□□□ -0.07
RBM39-245ENST00000639702 TOP2BQ02880 1626 aa14.61□□□□□ -0.07
RBM39-245ENST00000639702 MYO6Q9UM54 1294 aa14.61□□□□□ -0.07
RBM39-245ENST00000639702 CCP110O43303 1012 aa14.61□□□□□ -0.07
RBM39-245ENST00000639702 ZNF530Q6P9A1 599 aaPredicted RBP14.61□□□□□ -0.07
RBM39-245ENST00000639702 DHX8Q14562 1220 aaKnown RBP14.61□□□□□ -0.07
RBM39-245ENST00000639702 NOB1Q9ULX3 412 aaKnown RBP14.61□□□□□ -0.07
RBM39-245ENST00000639702 DAPK1P53355 1430 aa14.61□□□□□ -0.07
RBM39-245ENST00000639702 ARAP1Q96P48 1450 aa14.61□□□□□ -0.07
RBM39-245ENST00000639702 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
RBM39-245ENST00000639702 FILIP1LQ4L180 1135 aa14.61□□□□□ -0.07
RBM39-245ENST00000639702 SULT6B1Q6IMI4 303 aa14.61□□□□□ -0.07
RBM39-245ENST00000639702 MAGEC2Q9UBF1 373 aaPredicted RBP14.61□□□□□ -0.07
RBM39-245ENST00000639702 CABP1Q9NZU7 370 aa14.6□□□□□ -0.07
RBM39-245ENST00000639702 LRRCC1Q9C099 1032 aa14.6□□□□□ -0.07
RBM39-245ENST00000639702 KINO60870 393 aaKnown RBP14.6□□□□□ -0.07
RBM39-245ENST00000639702 AEBP1Q8IUX7 1158 aa14.6□□□□□ -0.07
RBM39-245ENST00000639702 JMYQ8N9B5 988 aa14.6□□□□□ -0.07
RBM39-245ENST00000639702 SMARCE1Q969G3 411 aa14.6□□□□□ -0.07
RBM39-245ENST00000639702 IFT57Q9NWB7 429 aa14.6□□□□□ -0.07
RBM39-245ENST00000639702 SYNJ1O43426 1573 aa14.6□□□□□ -0.07
RBM39-245ENST00000639702 FAM177BA6PVY3 158 aa14.6□□□□□ -0.07
RBM39-245ENST00000639702 DNMBPQ6XZF7 1577 aa14.59□□□□□ -0.07
RBM39-245ENST00000639702 CCAR1Q8IX12 1150 aaKnown RBP14.59□□□□□ -0.07
RBM39-245ENST00000639702 ZNF428Q96B54 188 aa14.59□□□□□ -0.07
RBM39-245ENST00000639702 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.59□□□□□ -0.071e-6■■■■■ 29.9
RBM39-245ENST00000639702 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
RBM39-245ENST00000639702 CYP46A1Q9Y6A2 500 aa14.58□□□□□ -0.08
RBM39-245ENST00000639702 CCDC57Q2TAC2 916 aa14.57□□□□□ -0.08
RBM39-245ENST00000639702 TRIM22Q8IYM9 498 aa14.57□□□□□ -0.08
RBM39-245ENST00000639702 MTMR7Q9Y216 660 aa14.57□□□□□ -0.08
RBM39-245ENST00000639702 MRE11P49959 708 aa14.57□□□□□ -0.08
RBM39-245ENST00000639702 PDILTQ8N807 584 aa14.57□□□□□ -0.08
RBM39-245ENST00000639702 TIAM1Q13009 1591 aa14.57□□□□□ -0.08
RBM39-245ENST00000639702 TMEM132AQ24JP5 1023 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms