RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 KCNH2Q12809 1159 aa12.25□□□□□ -0.45
RFC1-217ENST00000639695 STK17AQ9UEE5 414 aa12.24□□□□□ -0.45
RFC1-217ENST00000639695 MTMR2Q13614 643 aa12.23□□□□□ -0.45
RFC1-217ENST00000639695 BEGAINQ9BUH8 593 aa12.23□□□□□ -0.45
RFC1-217ENST00000639695 ZNF511Q8NB15 262 aa12.22□□□□□ -0.45
RFC1-217ENST00000639695 PCDHB15Q9Y5E8 787 aa12.22□□□□□ -0.45
RFC1-217ENST00000639695 INSM1Q01101 510 aaPredicted RBP12.21□□□□□ -0.45
RFC1-217ENST00000639695 VEGFBP49765 207 aa12.2□□□□□ -0.46
RFC1-217ENST00000639695 TBC1D2Q9BYX2 928 aa12.2□□□□□ -0.46
RFC1-217ENST00000639695 CFAP99D6REC4 459 aa12.19□□□□□ -0.46
RFC1-217ENST00000639695 DESI1Q6ICB0 168 aa12.19□□□□□ -0.46
RFC1-217ENST00000639695 RSBN1LQ6PCB5 846 aaPredicted RBP12.19□□□□□ -0.46
RFC1-217ENST00000639695 AK7Q96M32 723 aa12.19□□□□□ -0.46
RFC1-217ENST00000639695 NXF1Q9UBU9 619 aaKnown RBP12.19□□□□□ -0.46
RFC1-217ENST00000639695 PARP9Q8IXQ6 854 aa12.18□□□□□ -0.46
RFC1-217ENST00000639695 ZFP42Q96MM3 310 aa12.18□□□□□ -0.46
RFC1-217ENST00000639695 NNTQ13423 1086 aa12.17□□□□□ -0.46
RFC1-217ENST00000639695 LORP23490 312 aaPredicted RBP12.16□□□□□ -0.46
RFC1-217ENST00000639695 VARSP26640 1264 aaKnown RBP12.16□□□□□ -0.46
RFC1-217ENST00000639695 GMPRP36959 345 aa12.16□□□□□ -0.46
RFC1-217ENST00000639695 LYPD8Q6UX82 237 aa12.16□□□□□ -0.46
RFC1-217ENST00000639695 MAP10Q9P2G4 905 aa12.16□□□□□ -0.46
RFC1-217ENST00000639695 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
RFC1-217ENST00000639695 FOXJ1Q92949 421 aa12.15□□□□□ -0.46
RFC1-217ENST00000639695 TIMP2P16035 220 aa12.14□□□□□ -0.47
RFC1-217ENST00000639695 CTHP32929 405 aa12.14□□□□□ -0.47
RFC1-217ENST00000639695 ERBB4Q15303 1308 aa12.13□□□□□ -0.47
RFC1-217ENST00000639695 HRCP23327 699 aa12.13□□□□□ -0.47
RFC1-217ENST00000639695 CABLES1Q8TDN4 633 aa12.13□□□□□ -0.47
RFC1-217ENST00000639695 KLF16Q9BXK1 252 aaPredicted RBP12.13□□□□□ -0.47
RFC1-217ENST00000639695 TRIM66O15016 1216 aa12.12□□□□□ -0.47
RFC1-217ENST00000639695 SPTLC1O15269 473 aa12.12□□□□□ -0.47
RFC1-217ENST00000639695 F12P00748 615 aaPredicted RBP12.12□□□□□ -0.47
RFC1-217ENST00000639695 GJA5P36382 358 aa12.12□□□□□ -0.47
RFC1-217ENST00000639695 MPNDQ8N594 471 aa12.12□□□□□ -0.47
RFC1-217ENST00000639695 SLC16A10Q8TF71 515 aa12.12□□□□□ -0.47
RFC1-217ENST00000639695 SOBPA7XYQ1 873 aa12.11□□□□□ -0.47
RFC1-217ENST00000639695 H3BM21 787 aa12.11□□□□□ -0.47
RFC1-217ENST00000639695 PER1O15534 1290 aaPredicted RBP12.1□□□□□ -0.47
RFC1-217ENST00000639695 WDR4P57081 412 aaKnown RBP12.1□□□□□ -0.47
RFC1-217ENST00000639695 C4orf48Q5BLP8 95 aa12.1□□□□□ -0.47
RFC1-217ENST00000639695 MRPL14Q6P1L8 145 aaKnown RBP12.1□□□□□ -0.47
RFC1-217ENST00000639695 PURBQ96QR8 312 aaKnown RBP12.1□□□□□ -0.47
RFC1-217ENST00000639695 PLEKHG3A1L390 1219 aa12.09□□□□□ -0.47
RFC1-217ENST00000639695 SUPT5HO00267 1087 aaKnown RBP12.09□□□□□ -0.47
RFC1-217ENST00000639695 RIC3Q7Z5B4 369 aa12.08□□□□□ -0.48
RFC1-217ENST00000639695 ADH1CP00326 375 aa12.07□□□□□ -0.48
RFC1-217ENST00000639695 CSPP1Q1MSJ5 1256 aa12.07□□□□□ -0.48
RFC1-217ENST00000639695 ZBTB3Q9H5J0 574 aa12.07□□□□□ -0.48
RFC1-217ENST00000639695 ZFAND3Q9H8U3 227 aa12.07□□□□□ -0.48
RFC1-217ENST00000639695 NR3C2P08235 984 aa12.06□□□□□ -0.48
RFC1-217ENST00000639695 NPAS3Q8IXF0 933 aa12.06□□□□□ -0.48
RFC1-217ENST00000639695 FAM174AQ8TBP5 190 aa12.06□□□□□ -0.48
RFC1-217ENST00000639695 IRF7Q92985 503 aa12.06□□□□□ -0.48
RFC1-217ENST00000639695 CDK15Q96Q40 435 aa12.06□□□□□ -0.48
RFC1-217ENST00000639695 LIMD1Q9UGP4 676 aa12.06□□□□□ -0.48
RFC1-217ENST00000639695 ARID5BQ14865 1188 aa12.05□□□□□ -0.48
RFC1-217ENST00000639695 QPCTQ16769 361 aa12.04□□□□□ -0.48
RFC1-217ENST00000639695 IL27Q8NEV9 243 aa12.04□□□□□ -0.48
RFC1-217ENST00000639695 ITPKCQ96DU7 683 aa12.04□□□□□ -0.48
RFC1-217ENST00000639695 DIXDC1Q155Q3 683 aa12.03□□□□□ -0.48
RFC1-217ENST00000639695 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
RFC1-217ENST00000639695 ZIC2O95409 532 aaPredicted RBP12.02□□□□□ -0.49
RFC1-217ENST00000639695 GRM5P41594 1212 aa12.02□□□□□ -0.49
RFC1-217ENST00000639695 PRPF38BQ5VTL8 546 aaKnown RBP12.02□□□□□ -0.49
RFC1-217ENST00000639695 KDM4CQ9H3R0 1056 aa12.02□□□□□ -0.49
RFC1-217ENST00000639695 SCARF1Q14162 830 aa12.01□□□□□ -0.49
RFC1-217ENST00000639695 MYSM1Q5VVJ2 828 aa12.01□□□□□ -0.49
RFC1-217ENST00000639695 ZSCAN1Q8NBB4 408 aa12.01□□□□□ -0.49
RFC1-217ENST00000639695 TSC1Q92574 1164 aa11.99□□□□□ -0.49
RFC1-217ENST00000639695 PDE4DQ08499 809 aa11.98□□□□□ -0.49
RFC1-217ENST00000639695 C6orf118Q5T5N4 469 aa11.98□□□□□ -0.49
RFC1-217ENST00000639695 AGERQ15109 404 aa11.97□□□□□ -0.49
RFC1-217ENST00000639695 LILRB3O75022 631 aa11.96□□□□□ -0.49
RFC1-217ENST00000639695 RTL5Q5HYW3 569 aaPredicted RBP11.96□□□□□ -0.49
RFC1-217ENST00000639695 NR5A1Q13285 461 aa11.95□□□□□ -0.5
RFC1-217ENST00000639695 C1QTNF2Q9BXJ5 285 aa11.95□□□□□ -0.5
RFC1-217ENST00000639695 SH3RF1Q7Z6J0 888 aa11.94□□□□□ -0.5
RFC1-217ENST00000639695 BPHLQ86WA6 291 aaPredicted RBP11.94□□□□□ -0.5
RFC1-217ENST00000639695 ZMYND15Q9H091 742 aa11.94□□□□□ -0.5
RFC1-217ENST00000639695 NUTM2BA6NNL0 878 aaPredicted RBP11.93□□□□□ -0.5
RFC1-217ENST00000639695 NUTM2EB1AL46 878 aaPredicted RBP11.93□□□□□ -0.5
RFC1-217ENST00000639695 VSIG8P0DPA2 414 aa11.93□□□□□ -0.5
RFC1-217ENST00000639695 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
RFC1-217ENST00000639695 NUTM2AQ8IVF1 878 aaPredicted RBP11.93□□□□□ -0.5
RFC1-217ENST00000639695 MEIOBQ8N635 442 aa11.92□□□□□ -0.5
RFC1-217ENST00000639695 MAN1A2O60476 641 aa11.91□□□□□ -0.5
RFC1-217ENST00000639695 FSHRP23945 695 aa11.91□□□□□ -0.5
RFC1-217ENST00000639695 TUSC1Q2TAM9 212 aa11.91□□□□□ -0.5
RFC1-217ENST00000639695 SH3BP5LQ7L8J4 393 aa11.91□□□□□ -0.5
RFC1-217ENST00000639695 LINC00528Q8N1L1 170 aa11.91□□□□□ -0.5
RFC1-217ENST00000639695 FAM181BA6NEQ2 426 aa11.9□□□□□ -0.5
RFC1-217ENST00000639695 BMP2P12643 396 aa11.89□□□□□ -0.51
RFC1-217ENST00000639695 RSPH6AQ9H0K4 717 aa11.89□□□□□ -0.51
RFC1-217ENST00000639695 DNMT3LQ9UJW3 386 aa11.89□□□□□ -0.51
RFC1-217ENST00000639695 PPFIA3O75145 1194 aa11.88□□□□□ -0.51
RFC1-217ENST00000639695 SOS2Q07890 1332 aaPredicted RBP11.87□□□□□ -0.51
RFC1-217ENST00000639695 MAGEB6P1A0A0J9YX57 407 aa11.87□□□□□ -0.51
RFC1-217ENST00000639695 VASH1Q7L8A9 365 aaPredicted RBP11.86□□□□□ -0.51
RFC1-217ENST00000639695 TRMT44Q8IYL2 757 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms