RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
CHD1L-211ENST00000639534 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
CHD1L-211ENST00000639534 TRMT2AQ8IZ69 625 aaKnown RBP19.06■□□□□ 0.64
CHD1L-211ENST00000639534 PLEKHG3A1L390 1219 aa19.05■□□□□ 0.64
CHD1L-211ENST00000639534 CCDC27Q2M243 656 aa19.05■□□□□ 0.64
CHD1L-211ENST00000639534 DUSP27Q5VZP5 1158 aa19.05■□□□□ 0.64
CHD1L-211ENST00000639534 ANKLE2Q86XL3 938 aa19.05■□□□□ 0.64
CHD1L-211ENST00000639534 AATKQ6ZMQ8 1374 aa19.05■□□□□ 0.64
CHD1L-211ENST00000639534 U2AF1L5P0DN76 240 aaPredicted RBP19.03■□□□□ 0.64
CHD1L-211ENST00000639534 U2AF1Q01081 240 aaKnown RBP eCLIP19.03■□□□□ 0.642e-10■■□□□ 12.5
CHD1L-211ENST00000639534 PRR36Q9H6K5 1346 aa19.02■□□□□ 0.64
CHD1L-211ENST00000639534 DIAPH1O60610 1272 aaKnown RBP19.02■□□□□ 0.64
CHD1L-211ENST00000639534 WDR63Q8IWG1 891 aa19.02■□□□□ 0.64
CHD1L-211ENST00000639534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.02■□□□□ 0.64
CHD1L-211ENST00000639534 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.02■□□□□ 0.64
CHD1L-211ENST00000639534 NKTRP30414 1462 aaKnown RBP19.02■□□□□ 0.63
CHD1L-211ENST00000639534 ANKARQ7Z5J8 1434 aa19.01■□□□□ 0.63
CHD1L-211ENST00000639534 COG3Q96JB2 828 aa19.01■□□□□ 0.63
CHD1L-211ENST00000639534 NRKQ7Z2Y5 1582 aa19.01■□□□□ 0.63
CHD1L-211ENST00000639534 WWC1Q8IX03 1113 aa19■□□□□ 0.63
CHD1L-211ENST00000639534 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
CHD1L-211ENST00000639534 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
CHD1L-211ENST00000639534 CDK12Q9NYV4 1490 aaPredicted RBP18.99■□□□□ 0.63
CHD1L-211ENST00000639534 SETD1BQ9UPS6 1966 aaKnown RBP18.98■□□□□ 0.63
CHD1L-211ENST00000639534 MAPK8IP3Q9UPT6 1336 aa18.98■□□□□ 0.63
CHD1L-211ENST00000639534 POLKQ9UBT6 870 aa18.97■□□□□ 0.63
CHD1L-211ENST00000639534 USP6P35125 1406 aa18.97■□□□□ 0.63
CHD1L-211ENST00000639534 TTC21AQ8NDW8 1320 aa18.97■□□□□ 0.63
CHD1L-211ENST00000639534 U2SURPO15042 1029 aaKnown RBP18.96■□□□□ 0.63
CHD1L-211ENST00000639534 NME9Q86XW9 330 aa18.96■□□□□ 0.63
CHD1L-211ENST00000639534 CCDC136Q96JN2 1154 aa18.96■□□□□ 0.63
CHD1L-211ENST00000639534 ACEP12821 1306 aa18.96■□□□□ 0.63
CHD1L-211ENST00000639534 TTC21BQ7Z4L5 1316 aa18.95■□□□□ 0.62
CHD1L-211ENST00000639534 FCHSD2O94868 740 aa18.94■□□□□ 0.62
CHD1L-211ENST00000639534 NEFMP07197 916 aa18.94■□□□□ 0.62
CHD1L-211ENST00000639534 CHD2O14647 1828 aaKnown RBP18.94■□□□□ 0.62
CHD1L-211ENST00000639534 B4GALNT3Q6L9W6 998 aa18.93■□□□□ 0.62
CHD1L-211ENST00000639534 PLEKHF1Q96S99 279 aa18.93■□□□□ 0.62
CHD1L-211ENST00000639534 MYH16Q9H6N6 1097 aa18.93■□□□□ 0.62
CHD1L-211ENST00000639534 FMN2Q9NZ56 1722 aa18.93■□□□□ 0.62
CHD1L-211ENST00000639534 KCNA6P17658 529 aa18.92■□□□□ 0.62
CHD1L-211ENST00000639534 TSHZ2Q9NRE2 1034 aa18.92■□□□□ 0.62
CHD1L-211ENST00000639534 NCKAP5LQ9HCH0 1330 aa18.92■□□□□ 0.62
CHD1L-211ENST00000639534 OVOS2A0A0J9YW53 1432 aa18.91■□□□□ 0.62
CHD1L-211ENST00000639534 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
CHD1L-211ENST00000639534 OVOS2Q6IE36 1432 aa18.91■□□□□ 0.62
CHD1L-211ENST00000639534 SSH2Q76I76 1423 aa18.91■□□□□ 0.62
CHD1L-211ENST00000639534 IL16Q14005 1332 aa18.91■□□□□ 0.62
CHD1L-211ENST00000639534 MAP2P11137 1827 aaKnown RBP18.9■□□□□ 0.62
CHD1L-211ENST00000639534 NALCNQ8IZF0 1738 aa18.9■□□□□ 0.62
CHD1L-211ENST00000639534 CT47B1P0C2W7 299 aaPredicted RBP18.89■□□□□ 0.61
CHD1L-211ENST00000639534 USP31Q70CQ4 1352 aa18.89■□□□□ 0.61
CHD1L-211ENST00000639534 TMPOP42166 694 aaKnown RBP18.88■□□□□ 0.61
CHD1L-211ENST00000639534 NEUROD2Q15784 382 aa18.88■□□□□ 0.61
CHD1L-211ENST00000639534 EXOC6Q8TAG9 804 aa18.88■□□□□ 0.61
CHD1L-211ENST00000639534 SPINK5Q9NQ38 1064 aaPredicted RBP18.88■□□□□ 0.61
CHD1L-211ENST00000639534 RRP7AQ9Y3A4 280 aaKnown RBP18.88■□□□□ 0.61
CHD1L-211ENST00000639534 LRRC7Q96NW7 1537 aa18.88■□□□□ 0.61
CHD1L-211ENST00000639534 NGDNQ8NEJ9 315 aaKnown RBP18.87■□□□□ 0.61
CHD1L-211ENST00000639534 PPM1GO15355 546 aaPredicted RBP18.86■□□□□ 0.61
CHD1L-211ENST00000639534 IL13P35225 146 aa18.86■□□□□ 0.61
CHD1L-211ENST00000639534 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
CHD1L-211ENST00000639534 RSPH6AQ9H0K4 717 aa18.85■□□□□ 0.61
CHD1L-211ENST00000639534 EMILIN1Q9Y6C2 1016 aa18.85■□□□□ 0.61
CHD1L-211ENST00000639534 ADGRL3Q9HAR2 1447 aa18.84■□□□□ 0.61
CHD1L-211ENST00000639534 CALD1Q05682 793 aaKnown RBP18.84■□□□□ 0.61
CHD1L-211ENST00000639534 ZRANB1Q9UGI0 708 aa18.84■□□□□ 0.61
CHD1L-211ENST00000639534 DMRT2Q9Y5R5 561 aa18.84■□□□□ 0.61
CHD1L-211ENST00000639534 USP54Q70EL1 1684 aa18.84■□□□□ 0.61
CHD1L-211ENST00000639534 NUTM2FA1L443 756 aa18.83■□□□□ 0.6
CHD1L-211ENST00000639534 PLIN1O60240 522 aa18.82■□□□□ 0.6
CHD1L-211ENST00000639534 PDE3AQ14432 1141 aa18.82■□□□□ 0.6
CHD1L-211ENST00000639534 CRBNQ96SW2 442 aa18.82■□□□□ 0.6
CHD1L-211ENST00000639534 KIF24Q5T7B8 1368 aa18.81■□□□□ 0.6
CHD1L-211ENST00000639534 PRKAR2BP31323 418 aa18.81■□□□□ 0.6
CHD1L-211ENST00000639534 RIPK4P57078 832 aa18.81■□□□□ 0.6
CHD1L-211ENST00000639534 LMOD3Q0VAK6 560 aa18.81■□□□□ 0.6
CHD1L-211ENST00000639534 TRIM35Q9UPQ4 493 aa18.81■□□□□ 0.6
CHD1L-211ENST00000639534 NFE2L2Q16236 605 aa18.8■□□□□ 0.6
CHD1L-211ENST00000639534 PMFBP1Q8TBY8 1022 aa18.8■□□□□ 0.6
CHD1L-211ENST00000639534 RGPD8O14715 1765 aaPredicted RBP18.8■□□□□ 0.6
CHD1L-211ENST00000639534 AAMPQ13685 434 aa18.79■□□□□ 0.6
CHD1L-211ENST00000639534 RRS1Q15050 365 aaKnown RBP18.78■□□□□ 0.6
CHD1L-211ENST00000639534 SBNO1A3KN83 1393 aa18.78■□□□□ 0.6
CHD1L-211ENST00000639534 PIK3C2AO00443 1686 aa18.77■□□□□ 0.6
CHD1L-211ENST00000639534 FBLN1P23142 703 aa18.77■□□□□ 0.6
CHD1L-211ENST00000639534 RARSP54136 660 aaKnown RBP18.77■□□□□ 0.6
CHD1L-211ENST00000639534 PHF8Q9UPP1 1060 aa18.77■□□□□ 0.6
CHD1L-211ENST00000639534 MS4A1P11836 297 aa18.76■□□□□ 0.59
CHD1L-211ENST00000639534 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
CHD1L-211ENST00000639534 FLT4P35916 1363 aa18.76■□□□□ 0.59
CHD1L-211ENST00000639534 FANCIQ9NVI1 1328 aa18.75■□□□□ 0.59
CHD1L-211ENST00000639534 BCAR3O75815 825 aa18.75■□□□□ 0.59
CHD1L-211ENST00000639534 ARHGEF10O15013 1369 aa18.74■□□□□ 0.59
CHD1L-211ENST00000639534 EIF4A2Q14240 407 aaKnown RBP18.74■□□□□ 0.59
CHD1L-211ENST00000639534 ZNF428Q96B54 188 aa18.74■□□□□ 0.59
CHD1L-211ENST00000639534 HMOX1P09601 288 aa18.73■□□□□ 0.59
CHD1L-211ENST00000639534 C20orf194Q5TEA3 1177 aa18.73■□□□□ 0.59
CHD1L-211ENST00000639534 RGPD1P0DJD0 1748 aa18.73■□□□□ 0.59
CHD1L-211ENST00000639534 PEAK1Q9H792 1746 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms