RNA–Protein interactions for RNA: ENST00000639457.1

MED17-218, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 1,798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-218	ENST00000639457	NME9	Q86XW9	330 aa		32.93	■■■□□ 2.86
MED17-218	ENST00000639457	TMEM94	Q12767	1356 aa		32.92	■■■□□ 2.86
MED17-218	ENST00000639457	ZBED9	Q6R2W3	1325 aa		32.92	■■■□□ 2.86
MED17-218	ENST00000639457	SCAF1	Q9H7N4	1312 aa	Known RBP	32.92	■■■□□ 2.86
MED17-218	ENST00000639457	COG3	Q96JB2	828 aa		32.91	■■■□□ 2.86
MED17-218	ENST00000639457	TTC21A	Q8NDW8	1320 aa		32.91	■■■□□ 2.86
MED17-218	ENST00000639457	PHF8	Q9UPP1	1060 aa		32.91	■■■□□ 2.86
MED17-218	ENST00000639457	DMRT2	Q9Y5R5	561 aa		32.91	■■■□□ 2.86
MED17-218	ENST00000639457	SSH2	Q76I76	1423 aa		32.9	■■■□□ 2.86
MED17-218	ENST00000639457	ADAMTS8	Q9UP79	889 aa		32.88	■■■□□ 2.85
MED17-218	ENST00000639457	DCC	P43146	1447 aa		32.87	■■■□□ 2.85
MED17-218	ENST00000639457	BLM	P54132	1417 aa	Predicted RBP	32.87	■■■□□ 2.85
MED17-218	ENST00000639457	ESCO1	Q5FWF5	840 aa		32.86	■■■□□ 2.85
MED17-218	ENST00000639457	ATF3	P18847	181 aa		32.85	■■■□□ 2.85
MED17-218	ENST00000639457	ZRANB1	Q9UGI0	708 aa		32.82	■■■□□ 2.84
MED17-218	ENST00000639457	AATK	Q6ZMQ8	1374 aa		32.82	■■■□□ 2.84
MED17-218	ENST00000639457	MSH6	P52701	1360 aa		32.8	■■■□□ 2.84
MED17-218	ENST00000639457	OVOS2	A0A0J9YW53	1432 aa		32.79	■■■□□ 2.84
MED17-218	ENST00000639457	OVOS2	Q6IE36	1432 aa		32.79	■■■□□ 2.84
MED17-218	ENST00000639457	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.78	■■■□□ 2.84
MED17-218	ENST00000639457	CADPS2	Q86UW7	1296 aa		32.78	■■■□□ 2.84
MED17-218	ENST00000639457	C1orf167	Q5SNV9	1468 aa		32.77	■■■□□ 2.84
MED17-218	ENST00000639457	SHPRH	Q149N8	1683 aa		32.76	■■■□□ 2.84
MED17-218	ENST00000639457	POLK	Q9UBT6	870 aa		32.76	■■■□□ 2.84
MED17-218	ENST00000639457	USP31	Q70CQ4	1352 aa		32.75	■■■□□ 2.83
MED17-218	ENST00000639457	LRRC7	Q96NW7	1537 aa		32.75	■■■□□ 2.83
MED17-218	ENST00000639457	PSME1	Q06323	249 aa		32.75	■■■□□ 2.83
MED17-218	ENST00000639457	PNPLA6	Q8IY17	1366 aa		32.74	■■■□□ 2.83
MED17-218	ENST00000639457	ORAI2	Q96SN7	254 aa		32.74	■■■□□ 2.83
MED17-218	ENST00000639457	NUDC	Q9Y266	331 aa		32.74	■■■□□ 2.83
MED17-218	ENST00000639457	KIF1A	Q12756	1690 aa		32.74	■■■□□ 2.83
MED17-218	ENST00000639457	MAP2	P11137	1827 aa	Known RBP	32.73	■■■□□ 2.83
MED17-218	ENST00000639457	MST1R	Q04912	1400 aa		32.73	■■■□□ 2.83
MED17-218	ENST00000639457	SMG6	Q86US8	1419 aa	Known RBP	32.73	■■■□□ 2.83
MED17-218	ENST00000639457	COL3A1	P02461	1466 aa	Predicted RBP	32.71	■■■□□ 2.83
MED17-218	ENST00000639457	PIK3C2A	O00443	1686 aa		32.71	■■■□□ 2.83
MED17-218	ENST00000639457	PAK3	O75914	559 aa	Predicted RBP	32.7	■■■□□ 2.83
MED17-218	ENST00000639457	XIRP1	Q702N8	1843 aa	Known RBP	32.7	■■■□□ 2.83
MED17-218	ENST00000639457	PPM1G	O15355	546 aa	Predicted RBP	32.7	■■■□□ 2.82
MED17-218	ENST00000639457	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.68	■■■□□ 2.82
MED17-218	ENST00000639457	FBLN1	P23142	703 aa		32.68	■■■□□ 2.82
MED17-218	ENST00000639457	DIAPH1	O60610	1272 aa	Known RBP	32.68	■■■□□ 2.82
MED17-218	ENST00000639457	ABTB2	Q8N961	1025 aa		32.68	■■■□□ 2.82
MED17-218	ENST00000639457	FOXO3	O43524	673 aa		32.67	■■■□□ 2.82
MED17-218	ENST00000639457	NLRP6	P59044	892 aa		32.67	■■■□□ 2.82
MED17-218	ENST00000639457	EMILIN1	Q9Y6C2	1016 aa		32.66	■■■□□ 2.82
MED17-218	ENST00000639457	USP54	Q70EL1	1684 aa		32.65	■■■□□ 2.82
MED17-218	ENST00000639457	SENP3-EIF4A1	A0A087X0R7	540 aa		32.64	■■■□□ 2.82
MED17-218	ENST00000639457	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.64	■■■□□ 2.82
MED17-218	ENST00000639457	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.64	■■■□□ 2.82
MED17-218	ENST00000639457	RRS1	Q15050	365 aa	Known RBP	32.64	■■■□□ 2.82
MED17-218	ENST00000639457	CCDC146	Q8IYE0	955 aa		32.63	■■■□□ 2.81
MED17-218	ENST00000639457	U2SURP	O15042	1029 aa	Known RBP	32.6	■■■□□ 2.81
MED17-218	ENST00000639457	NGEF	Q8N5V2	710 aa		32.6	■■■□□ 2.81
MED17-218	ENST00000639457	SALL2	Q9Y467	1007 aa	Predicted RBP	32.6	■■■□□ 2.81
MED17-218	ENST00000639457	RUNDC1	Q96C34	613 aa		32.6	■■■□□ 2.81
MED17-218	ENST00000639457	PDE3B	Q13370	1112 aa		32.59	■■■□□ 2.81
MED17-218	ENST00000639457	KRT28	Q7Z3Y7	464 aa		32.58	■■■□□ 2.81
MED17-218	ENST00000639457	NUTM2G	Q5VZR2	741 aa		32.57	■■■□□ 2.8
MED17-218	ENST00000639457	APAF1	O14727	1248 aa		32.55	■■■□□ 2.8
MED17-218	ENST00000639457	SOX12	O15370	315 aa		32.55	■■■□□ 2.8
MED17-218	ENST00000639457	PNN	Q9H307	717 aa	Known RBP	32.55	■■■□□ 2.8
MED17-218	ENST00000639457	MARF1	Q9Y4F3	1742 aa	Known RBP	32.55	■■■□□ 2.8
MED17-218	ENST00000639457	XPC	Q01831	940 aa	Predicted RBP	32.54	■■■□□ 2.8
MED17-218	ENST00000639457	NPHP3	Q7Z494	1330 aa		32.54	■■■□□ 2.8
MED17-218	ENST00000639457	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.53	■■■□□ 2.8
MED17-218	ENST00000639457	IL13	P35225	146 aa		32.52	■■■□□ 2.8
MED17-218	ENST00000639457	MAP3K19	Q56UN5	1328 aa		32.51	■■■□□ 2.8
MED17-218	ENST00000639457	SBNO1	A3KN83	1393 aa		32.51	■■■□□ 2.79
MED17-218	ENST00000639457	GTF3C3	Q9Y5Q9	886 aa		32.51	■■■□□ 2.79
MED17-218	ENST00000639457	KIF24	Q5T7B8	1368 aa		32.5	■■■□□ 2.79
MED17-218	ENST00000639457	SLAIN2	Q9P270	581 aa		32.5	■■■□□ 2.79
MED17-218	ENST00000639457	KCNH5	Q8NCM2	988 aa		32.49	■■■□□ 2.79
MED17-218	ENST00000639457	FLT4	P35916	1363 aa		32.48	■■■□□ 2.79
MED17-218	ENST00000639457	FCHSD2	O94868	740 aa		32.48	■■■□□ 2.79
MED17-218	ENST00000639457	AMPH	P49418	695 aa		32.47	■■■□□ 2.79
MED17-218	ENST00000639457	PEAK1	Q9H792	1746 aa		32.47	■■■□□ 2.79
MED17-218	ENST00000639457	BRINP3	Q76B58	766 aa		32.46	■■■□□ 2.79
MED17-218	ENST00000639457	TCP11L2	Q8N4U5	519 aa		32.46	■■■□□ 2.79
MED17-218	ENST00000639457	IQSEC2	Q5JU85	1478 aa		32.46	■■■□□ 2.79
MED17-218	ENST00000639457	LMOD2	Q6P5Q4	547 aa		32.45	■■■□□ 2.79
MED17-218	ENST00000639457	NCBP3	Q53F19	620 aa	Known RBP	32.45	■■■□□ 2.78
MED17-218	ENST00000639457	PLEKHF1	Q96S99	279 aa		32.45	■■■□□ 2.78
MED17-218	ENST00000639457	ZNF521	Q96K83	1311 aa		32.45	■■■□□ 2.78
MED17-218	ENST00000639457	MAPK8IP3	Q9UPT6	1336 aa		32.45	■■■□□ 2.78
MED17-218	ENST00000639457	HSP90AB2P	Q58FF8	381 aa		32.43	■■■□□ 2.78
MED17-218	ENST00000639457	EIF4A2	Q14240	407 aa	Known RBP	32.42	■■■□□ 2.78
MED17-218	ENST00000639457	NEFM	P07197	916 aa		32.42	■■■□□ 2.78
MED17-218	ENST00000639457	ALS2	Q96Q42	1657 aa		32.41	■■■□□ 2.78
MED17-218	ENST00000639457	NFAT5	O94916	1531 aa		32.41	■■■□□ 2.78
MED17-218	ENST00000639457	RTL1	A6NKG5	1358 aa		32.4	■■■□□ 2.78
MED17-218	ENST00000639457	SLIT3	O75094	1523 aa		32.4	■■■□□ 2.78
MED17-218	ENST00000639457	PXDN	Q92626	1479 aa		32.4	■■■□□ 2.78
MED17-218	ENST00000639457	USP19	O94966	1318 aa		32.4	■■■□□ 2.78
MED17-218	ENST00000639457	GOLGA2	Q08379	1002 aa		32.4	■■■□□ 2.78
MED17-218	ENST00000639457	DDX17	Q92841	729 aa	Known RBP	32.4	■■■□□ 2.78
MED17-218	ENST00000639457	RSPH6A	Q9H0K4	717 aa		32.4	■■■□□ 2.78
MED17-218	ENST00000639457	GC	P02774	474 aa		32.37	■■■□□ 2.77
MED17-218	ENST00000639457	CCDC27	Q2M243	656 aa		32.37	■■■□□ 2.77
MED17-218	ENST00000639457	TNS3	Q68CZ2	1445 aa		32.37	■■■□□ 2.77

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